Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23213 | 69862;69863;69864 | chr2:178576607;178576606;178576605 | chr2:179441334;179441333;179441332 |
N2AB | 21572 | 64939;64940;64941 | chr2:178576607;178576606;178576605 | chr2:179441334;179441333;179441332 |
N2A | 20645 | 62158;62159;62160 | chr2:178576607;178576606;178576605 | chr2:179441334;179441333;179441332 |
N2B | 14148 | 42667;42668;42669 | chr2:178576607;178576606;178576605 | chr2:179441334;179441333;179441332 |
Novex-1 | 14273 | 43042;43043;43044 | chr2:178576607;178576606;178576605 | chr2:179441334;179441333;179441332 |
Novex-2 | 14340 | 43243;43244;43245 | chr2:178576607;178576606;178576605 | chr2:179441334;179441333;179441332 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs1335495074 | -1.707 | 1.0 | D | 0.825 | 0.536 | 0.720252389933 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/C | rs1335495074 | -1.707 | 1.0 | D | 0.825 | 0.536 | 0.720252389933 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/C | rs1335495074 | -1.707 | 1.0 | D | 0.825 | 0.536 | 0.720252389933 | gnomAD-4.0.0 | 9.91679E-06 | None | None | None | None | N | None | 0 | 5.00233E-05 | None | 0 | 2.23025E-05 | None | 0 | 0 | 1.01727E-05 | 0 | 0 |
R/H | rs374883884 | -2.313 | 1.0 | D | 0.817 | 0.599 | None | gnomAD-2.1.1 | 7.86E-05 | None | None | None | None | N | None | 4.13E-05 | 5.66E-05 | None | 9.67E-05 | 7.19646E-04 | None | 9.8E-05 | None | 0 | 7.83E-06 | 0 |
R/H | rs374883884 | -2.313 | 1.0 | D | 0.817 | 0.599 | None | gnomAD-3.1.2 | 8.55E-05 | None | None | None | None | N | None | 4.83E-05 | 3.92773E-04 | 0 | 0 | 7.75494E-04 | None | 0 | 0 | 0 | 2.07211E-04 | 0 |
R/H | rs374883884 | -2.313 | 1.0 | D | 0.817 | 0.599 | None | gnomAD-4.0.0 | 2.6029E-05 | None | None | None | None | N | None | 6.66507E-05 | 1.4997E-04 | None | 3.37929E-05 | 2.45437E-04 | None | 3.12402E-05 | 0 | 6.7818E-06 | 4.39252E-05 | 3.20195E-05 |
R/P | rs374883884 | -1.342 | 1.0 | D | 0.801 | 0.609 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
R/P | rs374883884 | -1.342 | 1.0 | D | 0.801 | 0.609 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/P | rs374883884 | -1.342 | 1.0 | D | 0.801 | 0.609 | None | gnomAD-4.0.0 | 1.85935E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54316E-06 | 0 | 0 |
R/S | rs1335495074 | -2.122 | 1.0 | N | 0.738 | 0.493 | 0.54347143358 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/S | rs1335495074 | -2.122 | 1.0 | N | 0.738 | 0.493 | 0.54347143358 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/S | rs1335495074 | -2.122 | 1.0 | N | 0.738 | 0.493 | 0.54347143358 | gnomAD-4.0.0 | 6.5767E-06 | None | None | None | None | N | None | 2.41231E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9373 | likely_pathogenic | 0.9461 | pathogenic | -2.001 | Highly Destabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | N |
R/C | 0.3647 | ambiguous | 0.3781 | ambiguous | -1.935 | Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.538272985 | None | None | N |
R/D | 0.9964 | likely_pathogenic | 0.9966 | pathogenic | -0.751 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
R/E | 0.9339 | likely_pathogenic | 0.9397 | pathogenic | -0.55 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
R/F | 0.9426 | likely_pathogenic | 0.9467 | pathogenic | -1.401 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
R/G | 0.946 | likely_pathogenic | 0.9534 | pathogenic | -2.339 | Highly Destabilizing | 1.0 | D | 0.735 | prob.delet. | D | 0.55612375 | None | None | N |
R/H | 0.2269 | likely_benign | 0.2196 | benign | -2.186 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | D | 0.533500045 | None | None | N |
R/I | 0.8667 | likely_pathogenic | 0.8684 | pathogenic | -1.028 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
R/K | 0.4248 | ambiguous | 0.3892 | ambiguous | -1.373 | Destabilizing | 0.998 | D | 0.657 | neutral | None | None | None | None | N |
R/L | 0.7592 | likely_pathogenic | 0.7801 | pathogenic | -1.028 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.511774939 | None | None | N |
R/M | 0.8613 | likely_pathogenic | 0.8683 | pathogenic | -1.482 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
R/N | 0.9808 | likely_pathogenic | 0.9811 | pathogenic | -1.189 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
R/P | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -1.34 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.556630729 | None | None | N |
R/Q | 0.2506 | likely_benign | 0.2665 | benign | -1.182 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
R/S | 0.9604 | likely_pathogenic | 0.9631 | pathogenic | -2.193 | Highly Destabilizing | 1.0 | D | 0.738 | prob.delet. | N | 0.516619877 | None | None | N |
R/T | 0.9222 | likely_pathogenic | 0.9258 | pathogenic | -1.781 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
R/V | 0.8855 | likely_pathogenic | 0.8899 | pathogenic | -1.34 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
R/W | 0.5496 | ambiguous | 0.5673 | pathogenic | -0.855 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
R/Y | 0.8748 | likely_pathogenic | 0.882 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.