Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23217 | 69874;69875;69876 | chr2:178576595;178576594;178576593 | chr2:179441322;179441321;179441320 |
N2AB | 21576 | 64951;64952;64953 | chr2:178576595;178576594;178576593 | chr2:179441322;179441321;179441320 |
N2A | 20649 | 62170;62171;62172 | chr2:178576595;178576594;178576593 | chr2:179441322;179441321;179441320 |
N2B | 14152 | 42679;42680;42681 | chr2:178576595;178576594;178576593 | chr2:179441322;179441321;179441320 |
Novex-1 | 14277 | 43054;43055;43056 | chr2:178576595;178576594;178576593 | chr2:179441322;179441321;179441320 |
Novex-2 | 14344 | 43255;43256;43257 | chr2:178576595;178576594;178576593 | chr2:179441322;179441321;179441320 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs72646884 | -1.149 | 0.999 | N | 0.669 | 0.388 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/A | rs72646884 | -1.149 | 0.999 | N | 0.669 | 0.388 | None | gnomAD-4.0.0 | 6.84278E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09594E-06 | 0 | 1.65689E-05 |
E/K | rs767473022 | -0.976 | 0.999 | N | 0.545 | 0.4 | 0.308278614506 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/K | rs767473022 | -0.976 | 0.999 | N | 0.545 | 0.4 | 0.308278614506 | gnomAD-4.0.0 | 1.59168E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85912E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3243 | likely_benign | 0.358 | ambiguous | -0.72 | Destabilizing | 0.999 | D | 0.669 | neutral | N | 0.509493959 | None | None | I |
E/C | 0.8828 | likely_pathogenic | 0.8945 | pathogenic | -0.572 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
E/D | 0.7026 | likely_pathogenic | 0.7066 | pathogenic | -1.417 | Destabilizing | 0.999 | D | 0.481 | neutral | N | 0.489966792 | None | None | I |
E/F | 0.8867 | likely_pathogenic | 0.8956 | pathogenic | -0.868 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
E/G | 0.5355 | ambiguous | 0.5702 | pathogenic | -1.068 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.487333446 | None | None | I |
E/H | 0.7723 | likely_pathogenic | 0.7939 | pathogenic | -1.229 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
E/I | 0.3626 | ambiguous | 0.3527 | ambiguous | 0.225 | Stabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
E/K | 0.2951 | likely_benign | 0.333 | benign | -0.887 | Destabilizing | 0.999 | D | 0.545 | neutral | N | 0.518537517 | None | None | I |
E/L | 0.6353 | likely_pathogenic | 0.6273 | pathogenic | 0.225 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
E/M | 0.543 | ambiguous | 0.5514 | ambiguous | 0.747 | Stabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
E/N | 0.7585 | likely_pathogenic | 0.7677 | pathogenic | -1.161 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
E/P | 0.9966 | likely_pathogenic | 0.9973 | pathogenic | -0.068 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | I |
E/Q | 0.1519 | likely_benign | 0.1659 | benign | -0.99 | Destabilizing | 1.0 | D | 0.622 | neutral | N | 0.466796428 | None | None | I |
E/R | 0.4424 | ambiguous | 0.4983 | ambiguous | -0.89 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
E/S | 0.4674 | ambiguous | 0.4937 | ambiguous | -1.586 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | I |
E/T | 0.4481 | ambiguous | 0.4717 | ambiguous | -1.281 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
E/V | 0.2071 | likely_benign | 0.205 | benign | -0.068 | Destabilizing | 1.0 | D | 0.809 | deleterious | N | 0.430256811 | None | None | I |
E/W | 0.9675 | likely_pathogenic | 0.9709 | pathogenic | -0.994 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
E/Y | 0.8721 | likely_pathogenic | 0.8884 | pathogenic | -0.699 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.