Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23224 | 69895;69896;69897 | chr2:178576574;178576573;178576572 | chr2:179441301;179441300;179441299 |
N2AB | 21583 | 64972;64973;64974 | chr2:178576574;178576573;178576572 | chr2:179441301;179441300;179441299 |
N2A | 20656 | 62191;62192;62193 | chr2:178576574;178576573;178576572 | chr2:179441301;179441300;179441299 |
N2B | 14159 | 42700;42701;42702 | chr2:178576574;178576573;178576572 | chr2:179441301;179441300;179441299 |
Novex-1 | 14284 | 43075;43076;43077 | chr2:178576574;178576573;178576572 | chr2:179441301;179441300;179441299 |
Novex-2 | 14351 | 43276;43277;43278 | chr2:178576574;178576573;178576572 | chr2:179441301;179441300;179441299 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs762758398 | -0.318 | 0.007 | N | 0.419 | 0.209 | 0.429203605099 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
P/L | rs762758398 | -0.318 | 0.007 | N | 0.419 | 0.209 | 0.429203605099 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/L | rs762758398 | -0.318 | 0.007 | N | 0.419 | 0.209 | 0.429203605099 | gnomAD-4.0.0 | 3.0989E-06 | None | None | None | None | I | None | 0 | 3.33378E-05 | None | 0 | 0 | None | 0 | 0 | 2.54313E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0776 | likely_benign | 0.0784 | benign | -1.113 | Destabilizing | 0.472 | N | 0.446 | neutral | N | 0.438098008 | None | None | I |
P/C | 0.3726 | ambiguous | 0.3905 | ambiguous | -0.769 | Destabilizing | 0.996 | D | 0.519 | neutral | None | None | None | None | I |
P/D | 0.3589 | ambiguous | 0.3752 | ambiguous | -0.908 | Destabilizing | 0.009 | N | 0.251 | neutral | None | None | None | None | I |
P/E | 0.1826 | likely_benign | 0.1881 | benign | -0.995 | Destabilizing | 0.005 | N | 0.198 | neutral | None | None | None | None | I |
P/F | 0.3054 | likely_benign | 0.3127 | benign | -1.124 | Destabilizing | 0.91 | D | 0.51 | neutral | None | None | None | None | I |
P/G | 0.2939 | likely_benign | 0.2917 | benign | -1.317 | Destabilizing | 0.742 | D | 0.502 | neutral | None | None | None | None | I |
P/H | 0.1657 | likely_benign | 0.1746 | benign | -0.815 | Destabilizing | 0.984 | D | 0.497 | neutral | None | None | None | None | I |
P/I | 0.1723 | likely_benign | 0.1743 | benign | -0.695 | Destabilizing | 0.835 | D | 0.539 | neutral | None | None | None | None | I |
P/K | 0.1736 | likely_benign | 0.1931 | benign | -0.86 | Destabilizing | 0.742 | D | 0.449 | neutral | None | None | None | None | I |
P/L | 0.0776 | likely_benign | 0.0797 | benign | -0.695 | Destabilizing | 0.007 | N | 0.419 | neutral | N | 0.462745736 | None | None | I |
P/M | 0.182 | likely_benign | 0.1842 | benign | -0.475 | Destabilizing | 0.91 | D | 0.495 | neutral | None | None | None | None | I |
P/N | 0.2665 | likely_benign | 0.276 | benign | -0.563 | Destabilizing | 0.59 | D | 0.543 | neutral | None | None | None | None | I |
P/Q | 0.1158 | likely_benign | 0.1217 | benign | -0.86 | Destabilizing | 0.684 | D | 0.564 | neutral | N | 0.449853797 | None | None | I |
P/R | 0.1493 | likely_benign | 0.1657 | benign | -0.244 | Destabilizing | 0.884 | D | 0.527 | neutral | N | 0.468882275 | None | None | I |
P/S | 0.1212 | likely_benign | 0.1227 | benign | -0.987 | Destabilizing | 0.684 | D | 0.443 | neutral | N | 0.487814752 | None | None | I |
P/T | 0.1026 | likely_benign | 0.1046 | benign | -0.979 | Destabilizing | 0.684 | D | 0.483 | neutral | N | 0.473538733 | None | None | I |
P/V | 0.1256 | likely_benign | 0.1278 | benign | -0.799 | Destabilizing | 0.59 | D | 0.509 | neutral | None | None | None | None | I |
P/W | 0.5024 | ambiguous | 0.5274 | ambiguous | -1.183 | Destabilizing | 0.996 | D | 0.613 | neutral | None | None | None | None | I |
P/Y | 0.2998 | likely_benign | 0.3137 | benign | -0.916 | Destabilizing | 0.953 | D | 0.503 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.