Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23225 | 69898;69899;69900 | chr2:178576571;178576570;178576569 | chr2:179441298;179441297;179441296 |
N2AB | 21584 | 64975;64976;64977 | chr2:178576571;178576570;178576569 | chr2:179441298;179441297;179441296 |
N2A | 20657 | 62194;62195;62196 | chr2:178576571;178576570;178576569 | chr2:179441298;179441297;179441296 |
N2B | 14160 | 42703;42704;42705 | chr2:178576571;178576570;178576569 | chr2:179441298;179441297;179441296 |
Novex-1 | 14285 | 43078;43079;43080 | chr2:178576571;178576570;178576569 | chr2:179441298;179441297;179441296 |
Novex-2 | 14352 | 43279;43280;43281 | chr2:178576571;178576570;178576569 | chr2:179441298;179441297;179441296 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.997 | N | 0.745 | 0.371 | 0.240491677333 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0679 | likely_benign | 0.0762 | benign | -1.192 | Destabilizing | 0.977 | D | 0.627 | neutral | N | 0.480861758 | None | None | I |
P/C | 0.4039 | ambiguous | 0.4553 | ambiguous | -0.871 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
P/D | 0.7842 | likely_pathogenic | 0.8162 | pathogenic | -0.805 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | I |
P/E | 0.5579 | ambiguous | 0.5999 | pathogenic | -0.887 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | I |
P/F | 0.3593 | ambiguous | 0.3911 | ambiguous | -1.184 | Destabilizing | 0.99 | D | 0.815 | deleterious | None | None | None | None | I |
P/G | 0.4658 | ambiguous | 0.5121 | ambiguous | -1.394 | Destabilizing | 0.998 | D | 0.704 | prob.neutral | None | None | None | None | I |
P/H | 0.2864 | likely_benign | 0.3167 | benign | -0.843 | Destabilizing | 0.998 | D | 0.845 | deleterious | D | 0.522896846 | None | None | I |
P/I | 0.3164 | likely_benign | 0.3574 | ambiguous | -0.778 | Destabilizing | 0.995 | D | 0.839 | deleterious | None | None | None | None | I |
P/K | 0.6017 | likely_pathogenic | 0.6374 | pathogenic | -0.856 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | I |
P/L | 0.1454 | likely_benign | 0.1695 | benign | -0.778 | Destabilizing | 0.987 | D | 0.739 | prob.delet. | N | 0.511398729 | None | None | I |
P/M | 0.3246 | likely_benign | 0.3741 | ambiguous | -0.579 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
P/N | 0.6249 | likely_pathogenic | 0.6714 | pathogenic | -0.574 | Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | I |
P/Q | 0.2781 | likely_benign | 0.3203 | benign | -0.867 | Destabilizing | 0.998 | D | 0.816 | deleterious | None | None | None | None | I |
P/R | 0.3846 | ambiguous | 0.4286 | ambiguous | -0.259 | Destabilizing | 0.997 | D | 0.833 | deleterious | N | 0.518262037 | None | None | I |
P/S | 0.162 | likely_benign | 0.1846 | benign | -1.04 | Destabilizing | 0.997 | D | 0.745 | deleterious | N | 0.494624373 | None | None | I |
P/T | 0.1603 | likely_benign | 0.2 | benign | -1.025 | Destabilizing | 0.997 | D | 0.775 | deleterious | N | 0.515388428 | None | None | I |
P/V | 0.1885 | likely_benign | 0.2175 | benign | -0.881 | Destabilizing | 0.995 | D | 0.757 | deleterious | None | None | None | None | I |
P/W | 0.6354 | likely_pathogenic | 0.6748 | pathogenic | -1.213 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | I |
P/Y | 0.421 | ambiguous | 0.452 | ambiguous | -0.951 | Destabilizing | 0.289 | N | 0.647 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.