Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23227 | 69904;69905;69906 | chr2:178576565;178576564;178576563 | chr2:179441292;179441291;179441290 |
N2AB | 21586 | 64981;64982;64983 | chr2:178576565;178576564;178576563 | chr2:179441292;179441291;179441290 |
N2A | 20659 | 62200;62201;62202 | chr2:178576565;178576564;178576563 | chr2:179441292;179441291;179441290 |
N2B | 14162 | 42709;42710;42711 | chr2:178576565;178576564;178576563 | chr2:179441292;179441291;179441290 |
Novex-1 | 14287 | 43084;43085;43086 | chr2:178576565;178576564;178576563 | chr2:179441292;179441291;179441290 |
Novex-2 | 14354 | 43285;43286;43287 | chr2:178576565;178576564;178576563 | chr2:179441292;179441291;179441290 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs765429292 | 0.793 | 0.03 | N | 0.417 | 0.088 | 0.259761712551 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs765429292 | 0.793 | 0.03 | N | 0.417 | 0.088 | 0.259761712551 | gnomAD-4.0.0 | 1.3686E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99556E-07 | 1.15974E-05 | 0 |
E/Q | rs765429292 | None | 0.002 | N | 0.212 | 0.107 | 0.197625483188 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs765429292 | None | 0.002 | N | 0.212 | 0.107 | 0.197625483188 | gnomAD-4.0.0 | 1.85934E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54313E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0891 | likely_benign | 0.0846 | benign | -0.394 | Destabilizing | None | N | 0.215 | neutral | N | 0.498852891 | None | None | I |
E/C | 0.6169 | likely_pathogenic | 0.5874 | pathogenic | -0.07 | Destabilizing | 0.685 | D | 0.427 | neutral | None | None | None | None | I |
E/D | 0.0822 | likely_benign | 0.0748 | benign | -0.333 | Destabilizing | None | N | 0.166 | neutral | N | 0.451080374 | None | None | I |
E/F | 0.5341 | ambiguous | 0.4884 | ambiguous | -0.24 | Destabilizing | 0.366 | N | 0.433 | neutral | None | None | None | None | I |
E/G | 0.1141 | likely_benign | 0.1098 | benign | -0.583 | Destabilizing | 0.012 | N | 0.385 | neutral | N | 0.467379085 | None | None | I |
E/H | 0.2954 | likely_benign | 0.2826 | benign | 0.062 | Stabilizing | 0.366 | N | 0.514 | neutral | None | None | None | None | I |
E/I | 0.2048 | likely_benign | 0.1854 | benign | 0.071 | Stabilizing | 0.221 | N | 0.477 | neutral | None | None | None | None | I |
E/K | 0.0944 | likely_benign | 0.0943 | benign | 0.363 | Stabilizing | 0.03 | N | 0.417 | neutral | N | 0.466319185 | None | None | I |
E/L | 0.1989 | likely_benign | 0.1833 | benign | 0.071 | Stabilizing | 0.039 | N | 0.515 | neutral | None | None | None | None | I |
E/M | 0.2794 | likely_benign | 0.2552 | benign | 0.15 | Stabilizing | 0.869 | D | 0.468 | neutral | None | None | None | None | I |
E/N | 0.1545 | likely_benign | 0.1369 | benign | -0.015 | Destabilizing | 0.039 | N | 0.473 | neutral | None | None | None | None | I |
E/P | 0.204 | likely_benign | 0.1856 | benign | -0.064 | Destabilizing | None | N | 0.301 | neutral | None | None | None | None | I |
E/Q | 0.1108 | likely_benign | 0.11 | benign | 0.024 | Stabilizing | 0.002 | N | 0.212 | neutral | N | 0.505992294 | None | None | I |
E/R | 0.161 | likely_benign | 0.1623 | benign | 0.581 | Stabilizing | 0.075 | N | 0.477 | neutral | None | None | None | None | I |
E/S | 0.1246 | likely_benign | 0.1146 | benign | -0.161 | Destabilizing | 0.016 | N | 0.407 | neutral | None | None | None | None | I |
E/T | 0.1466 | likely_benign | 0.1357 | benign | None | Stabilizing | 0.075 | N | 0.527 | neutral | None | None | None | None | I |
E/V | 0.1221 | likely_benign | 0.1133 | benign | -0.064 | Destabilizing | 0.03 | N | 0.479 | neutral | D | 0.523231261 | None | None | I |
E/W | 0.7466 | likely_pathogenic | 0.7242 | pathogenic | -0.071 | Destabilizing | 0.869 | D | 0.484 | neutral | None | None | None | None | I |
E/Y | 0.3986 | ambiguous | 0.3638 | ambiguous | 0.011 | Stabilizing | 0.637 | D | 0.489 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.