Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23236 | 69931;69932;69933 | chr2:178576538;178576537;178576536 | chr2:179441265;179441264;179441263 |
N2AB | 21595 | 65008;65009;65010 | chr2:178576538;178576537;178576536 | chr2:179441265;179441264;179441263 |
N2A | 20668 | 62227;62228;62229 | chr2:178576538;178576537;178576536 | chr2:179441265;179441264;179441263 |
N2B | 14171 | 42736;42737;42738 | chr2:178576538;178576537;178576536 | chr2:179441265;179441264;179441263 |
Novex-1 | 14296 | 43111;43112;43113 | chr2:178576538;178576537;178576536 | chr2:179441265;179441264;179441263 |
Novex-2 | 14363 | 43312;43313;43314 | chr2:178576538;178576537;178576536 | chr2:179441265;179441264;179441263 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.935 | N | 0.58 | 0.214 | 0.248417906384 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4787 | ambiguous | 0.5132 | ambiguous | -0.191 | Destabilizing | 0.877 | D | 0.436 | neutral | N | 0.510336534 | None | None | N |
D/C | 0.9327 | likely_pathogenic | 0.9286 | pathogenic | 0.036 | Stabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
D/E | 0.2956 | likely_benign | 0.3319 | benign | -0.343 | Destabilizing | 0.087 | N | 0.319 | neutral | N | 0.489539974 | None | None | N |
D/F | 0.9061 | likely_pathogenic | 0.9144 | pathogenic | -0.266 | Destabilizing | 0.971 | D | 0.678 | prob.neutral | None | None | None | None | N |
D/G | 0.5148 | ambiguous | 0.5351 | ambiguous | -0.348 | Destabilizing | 0.935 | D | 0.58 | neutral | N | 0.46918583 | None | None | N |
D/H | 0.7664 | likely_pathogenic | 0.7881 | pathogenic | 0.017 | Stabilizing | 0.998 | D | 0.465 | neutral | N | 0.49459792 | None | None | N |
D/I | 0.7689 | likely_pathogenic | 0.7983 | pathogenic | 0.162 | Stabilizing | 0.943 | D | 0.694 | prob.delet. | None | None | None | None | N |
D/K | 0.8509 | likely_pathogenic | 0.8736 | pathogenic | 0.356 | Stabilizing | 0.971 | D | 0.545 | neutral | None | None | None | None | N |
D/L | 0.777 | likely_pathogenic | 0.796 | pathogenic | 0.162 | Stabilizing | 0.618 | D | 0.478 | neutral | None | None | None | None | N |
D/M | 0.8874 | likely_pathogenic | 0.9027 | pathogenic | 0.214 | Stabilizing | 0.66 | D | 0.473 | neutral | None | None | None | None | N |
D/N | 0.2664 | likely_benign | 0.2985 | benign | 0.142 | Stabilizing | 0.981 | D | 0.534 | neutral | D | 0.522268468 | None | None | N |
D/P | 0.8805 | likely_pathogenic | 0.8744 | pathogenic | 0.065 | Stabilizing | 0.995 | D | 0.506 | neutral | None | None | None | None | N |
D/Q | 0.7796 | likely_pathogenic | 0.8089 | pathogenic | 0.142 | Stabilizing | 0.971 | D | 0.551 | neutral | None | None | None | None | N |
D/R | 0.8779 | likely_pathogenic | 0.8971 | pathogenic | 0.515 | Stabilizing | 0.971 | D | 0.591 | neutral | None | None | None | None | N |
D/S | 0.439 | ambiguous | 0.4702 | ambiguous | 0.043 | Stabilizing | 0.904 | D | 0.581 | neutral | None | None | None | None | N |
D/T | 0.6493 | likely_pathogenic | 0.6813 | pathogenic | 0.16 | Stabilizing | 0.971 | D | 0.533 | neutral | None | None | None | None | N |
D/V | 0.528 | ambiguous | 0.5666 | pathogenic | 0.065 | Stabilizing | 0.926 | D | 0.492 | neutral | N | 0.501572906 | None | None | N |
D/W | 0.9774 | likely_pathogenic | 0.9796 | pathogenic | -0.187 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
D/Y | 0.5728 | likely_pathogenic | 0.6119 | pathogenic | -0.041 | Destabilizing | 0.981 | D | 0.627 | neutral | N | 0.517057041 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.