Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23243 | 69952;69953;69954 | chr2:178576405;178576404;178576403 | chr2:179441132;179441131;179441130 |
N2AB | 21602 | 65029;65030;65031 | chr2:178576405;178576404;178576403 | chr2:179441132;179441131;179441130 |
N2A | 20675 | 62248;62249;62250 | chr2:178576405;178576404;178576403 | chr2:179441132;179441131;179441130 |
N2B | 14178 | 42757;42758;42759 | chr2:178576405;178576404;178576403 | chr2:179441132;179441131;179441130 |
Novex-1 | 14303 | 43132;43133;43134 | chr2:178576405;178576404;178576403 | chr2:179441132;179441131;179441130 |
Novex-2 | 14370 | 43333;43334;43335 | chr2:178576405;178576404;178576403 | chr2:179441132;179441131;179441130 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1221599663 | -1.267 | 1.0 | N | 0.855 | 0.434 | 0.34854441366 | gnomAD-2.1.1 | 4.71E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 4.24E-05 | None | 0 | 0 | 0 |
P/S | rs1221599663 | -1.267 | 1.0 | N | 0.855 | 0.434 | 0.34854441366 | gnomAD-4.0.0 | 3.39479E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.95069E-05 | 0 | 0 | 1.60318E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1538 | likely_benign | 0.1208 | benign | -1.433 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.460196154 | None | None | I |
P/C | 0.7488 | likely_pathogenic | 0.6371 | pathogenic | -0.922 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
P/D | 0.9559 | likely_pathogenic | 0.9117 | pathogenic | -1.71 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
P/E | 0.7722 | likely_pathogenic | 0.6566 | pathogenic | -1.754 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
P/F | 0.8086 | likely_pathogenic | 0.7191 | pathogenic | -1.332 | Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | I |
P/G | 0.7292 | likely_pathogenic | 0.6434 | pathogenic | -1.701 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | I |
P/H | 0.5871 | likely_pathogenic | 0.4697 | ambiguous | -1.289 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | I |
P/I | 0.6435 | likely_pathogenic | 0.5281 | ambiguous | -0.802 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | I |
P/K | 0.6367 | likely_pathogenic | 0.5082 | ambiguous | -1.097 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
P/L | 0.3677 | ambiguous | 0.2835 | benign | -0.802 | Destabilizing | 1.0 | D | 0.901 | deleterious | N | 0.505214346 | None | None | I |
P/M | 0.5972 | likely_pathogenic | 0.5001 | ambiguous | -0.514 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
P/N | 0.8592 | likely_pathogenic | 0.7754 | pathogenic | -0.846 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | I |
P/Q | 0.4474 | ambiguous | 0.3468 | ambiguous | -1.124 | Destabilizing | 1.0 | D | 0.871 | deleterious | N | 0.500477405 | None | None | I |
P/R | 0.5075 | ambiguous | 0.3864 | ambiguous | -0.539 | Destabilizing | 1.0 | D | 0.911 | deleterious | N | 0.503946898 | None | None | I |
P/S | 0.3919 | ambiguous | 0.296 | benign | -1.262 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.490184283 | None | None | I |
P/T | 0.4457 | ambiguous | 0.3386 | benign | -1.213 | Destabilizing | 1.0 | D | 0.853 | deleterious | N | 0.501744852 | None | None | I |
P/V | 0.5226 | ambiguous | 0.4121 | ambiguous | -0.979 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | I |
P/W | 0.9431 | likely_pathogenic | 0.9008 | pathogenic | -1.487 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | I |
P/Y | 0.8394 | likely_pathogenic | 0.7515 | pathogenic | -1.202 | Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.