Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23248 | 69967;69968;69969 | chr2:178576390;178576389;178576388 | chr2:179441117;179441116;179441115 |
N2AB | 21607 | 65044;65045;65046 | chr2:178576390;178576389;178576388 | chr2:179441117;179441116;179441115 |
N2A | 20680 | 62263;62264;62265 | chr2:178576390;178576389;178576388 | chr2:179441117;179441116;179441115 |
N2B | 14183 | 42772;42773;42774 | chr2:178576390;178576389;178576388 | chr2:179441117;179441116;179441115 |
Novex-1 | 14308 | 43147;43148;43149 | chr2:178576390;178576389;178576388 | chr2:179441117;179441116;179441115 |
Novex-2 | 14375 | 43348;43349;43350 | chr2:178576390;178576389;178576388 | chr2:179441117;179441116;179441115 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | rs1423241119 | 0.889 | 0.065 | N | 0.493 | 0.109 | 0.0666544352282 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 9.42E-05 | 0 | 0 | 0 | 0 |
H/P | rs1423241119 | 0.889 | 0.065 | N | 0.493 | 0.109 | 0.0666544352282 | gnomAD-4.0.0 | 1.91718E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.61655E-05 | 0 | 1.72E-06 | 0 | 0 |
H/Q | rs774642251 | 0.578 | 0.007 | N | 0.327 | 0.114 | 0.0297737177859 | gnomAD-2.1.1 | 1.48E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.09E-05 | 0 |
H/Q | rs774642251 | 0.578 | 0.007 | N | 0.327 | 0.114 | 0.0297737177859 | gnomAD-4.0.0 | 2.12342E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.73985E-06 | 0 | 0 |
H/R | None | None | None | N | 0.107 | 0.115 | 0.0297737177859 | gnomAD-4.0.0 | 7.07834E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.29675E-05 | 0 |
H/Y | rs1374089814 | 1.576 | 0.065 | N | 0.449 | 0.054 | 0.149567049428 | gnomAD-2.1.1 | 1.7E-05 | None | None | None | None | I | None | 1.72147E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/Y | rs1374089814 | 1.576 | 0.065 | N | 0.449 | 0.054 | 0.149567049428 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 9.66E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/Y | rs1374089814 | 1.576 | 0.065 | N | 0.449 | 0.054 | 0.149567049428 | gnomAD-4.0.0 | 6.83062E-06 | None | None | None | None | I | None | 8.85175E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2809 | likely_benign | 0.2661 | benign | -0.317 | Destabilizing | 0.008 | N | 0.294 | neutral | None | None | None | None | I |
H/C | 0.119 | likely_benign | 0.1218 | benign | 0.367 | Stabilizing | 0.788 | D | 0.407 | neutral | None | None | None | None | I |
H/D | 0.4452 | ambiguous | 0.4404 | ambiguous | -0.241 | Destabilizing | 0.007 | N | 0.347 | neutral | N | 0.432844117 | None | None | I |
H/E | 0.3523 | ambiguous | 0.344 | ambiguous | -0.163 | Destabilizing | None | N | 0.132 | neutral | None | None | None | None | I |
H/F | 0.2636 | likely_benign | 0.2658 | benign | 0.737 | Stabilizing | 0.245 | N | 0.517 | neutral | None | None | None | None | I |
H/G | 0.3719 | ambiguous | 0.3465 | ambiguous | -0.669 | Destabilizing | 0.018 | N | 0.305 | neutral | None | None | None | None | I |
H/I | 0.2329 | likely_benign | 0.2262 | benign | 0.631 | Stabilizing | 0.085 | N | 0.515 | neutral | None | None | None | None | I |
H/K | 0.1505 | likely_benign | 0.1484 | benign | -0.291 | Destabilizing | None | N | 0.189 | neutral | None | None | None | None | I |
H/L | 0.1198 | likely_benign | 0.1155 | benign | 0.631 | Stabilizing | 0.014 | N | 0.323 | neutral | N | 0.43147868 | None | None | I |
H/M | 0.3626 | ambiguous | 0.3572 | ambiguous | 0.435 | Stabilizing | 0.497 | N | 0.434 | neutral | None | None | None | None | I |
H/N | 0.17 | likely_benign | 0.1645 | benign | -0.351 | Destabilizing | 0.014 | N | 0.341 | neutral | N | 0.434825629 | None | None | I |
H/P | 0.7919 | likely_pathogenic | 0.759 | pathogenic | 0.338 | Stabilizing | 0.065 | N | 0.493 | neutral | N | 0.502493416 | None | None | I |
H/Q | 0.1231 | likely_benign | 0.1234 | benign | -0.131 | Destabilizing | 0.007 | N | 0.327 | neutral | N | 0.406233519 | None | None | I |
H/R | 0.0584 | likely_benign | 0.0599 | benign | -0.903 | Destabilizing | None | N | 0.107 | neutral | N | 0.330100964 | None | None | I |
H/S | 0.2703 | likely_benign | 0.2503 | benign | -0.311 | Destabilizing | 0.018 | N | 0.313 | neutral | None | None | None | None | I |
H/T | 0.2415 | likely_benign | 0.2231 | benign | -0.128 | Destabilizing | 0.018 | N | 0.319 | neutral | None | None | None | None | I |
H/V | 0.1768 | likely_benign | 0.1749 | benign | 0.338 | Stabilizing | 0.044 | N | 0.414 | neutral | None | None | None | None | I |
H/W | 0.3293 | likely_benign | 0.3225 | benign | 0.923 | Stabilizing | 0.788 | D | 0.435 | neutral | None | None | None | None | I |
H/Y | 0.1127 | likely_benign | 0.1124 | benign | 1.082 | Stabilizing | 0.065 | N | 0.449 | neutral | N | 0.454278182 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.