Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23249 | 69970;69971;69972 | chr2:178576387;178576386;178576385 | chr2:179441114;179441113;179441112 |
N2AB | 21608 | 65047;65048;65049 | chr2:178576387;178576386;178576385 | chr2:179441114;179441113;179441112 |
N2A | 20681 | 62266;62267;62268 | chr2:178576387;178576386;178576385 | chr2:179441114;179441113;179441112 |
N2B | 14184 | 42775;42776;42777 | chr2:178576387;178576386;178576385 | chr2:179441114;179441113;179441112 |
Novex-1 | 14309 | 43150;43151;43152 | chr2:178576387;178576386;178576385 | chr2:179441114;179441113;179441112 |
Novex-2 | 14376 | 43351;43352;43353 | chr2:178576387;178576386;178576385 | chr2:179441114;179441113;179441112 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.497 | N | 0.611 | 0.253 | 0.667787145914 | gnomAD-4.0.0 | 1.72789E-06 | None | None | None | None | I | None | 0 | 3.19428E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5547 | ambiguous | 0.5577 | ambiguous | -1.449 | Destabilizing | 0.001 | N | 0.273 | neutral | N | 0.521809895 | None | None | I |
V/C | 0.836 | likely_pathogenic | 0.818 | pathogenic | -1.065 | Destabilizing | 0.909 | D | 0.625 | neutral | None | None | None | None | I |
V/D | 0.972 | likely_pathogenic | 0.9719 | pathogenic | -1.016 | Destabilizing | 0.667 | D | 0.691 | prob.neutral | N | 0.515929222 | None | None | I |
V/E | 0.934 | likely_pathogenic | 0.9349 | pathogenic | -1.003 | Destabilizing | 0.567 | D | 0.637 | neutral | None | None | None | None | I |
V/F | 0.526 | ambiguous | 0.5419 | ambiguous | -1.148 | Destabilizing | 0.497 | N | 0.611 | neutral | N | 0.487083637 | None | None | I |
V/G | 0.7916 | likely_pathogenic | 0.7917 | pathogenic | -1.783 | Destabilizing | 0.124 | N | 0.668 | neutral | N | 0.514915264 | None | None | I |
V/H | 0.9643 | likely_pathogenic | 0.963 | pathogenic | -1.247 | Destabilizing | 0.968 | D | 0.704 | prob.neutral | None | None | None | None | I |
V/I | 0.071 | likely_benign | 0.0735 | benign | -0.632 | Destabilizing | None | N | 0.181 | neutral | N | 0.469671708 | None | None | I |
V/K | 0.9139 | likely_pathogenic | 0.9119 | pathogenic | -1.108 | Destabilizing | 0.567 | D | 0.639 | neutral | None | None | None | None | I |
V/L | 0.331 | likely_benign | 0.349 | ambiguous | -0.632 | Destabilizing | 0.009 | N | 0.449 | neutral | N | 0.519137737 | None | None | I |
V/M | 0.3708 | ambiguous | 0.3612 | ambiguous | -0.546 | Destabilizing | 0.567 | D | 0.58 | neutral | None | None | None | None | I |
V/N | 0.9158 | likely_pathogenic | 0.9176 | pathogenic | -0.923 | Destabilizing | 0.726 | D | 0.711 | prob.delet. | None | None | None | None | I |
V/P | 0.8495 | likely_pathogenic | 0.8665 | pathogenic | -0.869 | Destabilizing | 0.726 | D | 0.652 | neutral | None | None | None | None | I |
V/Q | 0.9143 | likely_pathogenic | 0.9094 | pathogenic | -1.048 | Destabilizing | 0.726 | D | 0.658 | neutral | None | None | None | None | I |
V/R | 0.8887 | likely_pathogenic | 0.8898 | pathogenic | -0.631 | Destabilizing | 0.726 | D | 0.712 | prob.delet. | None | None | None | None | I |
V/S | 0.8175 | likely_pathogenic | 0.821 | pathogenic | -1.499 | Destabilizing | 0.157 | N | 0.622 | neutral | None | None | None | None | I |
V/T | 0.6873 | likely_pathogenic | 0.673 | pathogenic | -1.355 | Destabilizing | 0.272 | N | 0.544 | neutral | None | None | None | None | I |
V/W | 0.9755 | likely_pathogenic | 0.9728 | pathogenic | -1.301 | Destabilizing | 0.968 | D | 0.716 | prob.delet. | None | None | None | None | I |
V/Y | 0.9044 | likely_pathogenic | 0.9035 | pathogenic | -1.006 | Destabilizing | 0.726 | D | 0.629 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.