Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23252 | 69979;69980;69981 | chr2:178576378;178576377;178576376 | chr2:179441105;179441104;179441103 |
N2AB | 21611 | 65056;65057;65058 | chr2:178576378;178576377;178576376 | chr2:179441105;179441104;179441103 |
N2A | 20684 | 62275;62276;62277 | chr2:178576378;178576377;178576376 | chr2:179441105;179441104;179441103 |
N2B | 14187 | 42784;42785;42786 | chr2:178576378;178576377;178576376 | chr2:179441105;179441104;179441103 |
Novex-1 | 14312 | 43159;43160;43161 | chr2:178576378;178576377;178576376 | chr2:179441105;179441104;179441103 |
Novex-2 | 14379 | 43360;43361;43362 | chr2:178576378;178576377;178576376 | chr2:179441105;179441104;179441103 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | N | 0.78 | 0.426 | 0.344251166708 | gnomAD-4.0.0 | 7.10046E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.15186E-07 | 0 | 0 |
T/S | rs1710103271 | None | 0.999 | N | 0.476 | 0.358 | 0.192905019026 | gnomAD-4.0.0 | 7.10046E-07 | None | None | None | None | N | None | 3.24781E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2647 | likely_benign | 0.2741 | benign | -0.8 | Destabilizing | 0.999 | D | 0.5 | neutral | N | 0.486118454 | None | None | N |
T/C | 0.602 | likely_pathogenic | 0.5919 | pathogenic | -0.868 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/D | 0.9107 | likely_pathogenic | 0.9054 | pathogenic | -1.256 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
T/E | 0.8301 | likely_pathogenic | 0.8276 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
T/F | 0.5249 | ambiguous | 0.4943 | ambiguous | -1.208 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
T/G | 0.7086 | likely_pathogenic | 0.6972 | pathogenic | -0.995 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/H | 0.5779 | likely_pathogenic | 0.5625 | ambiguous | -1.397 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
T/I | 0.3047 | likely_benign | 0.2901 | benign | -0.372 | Destabilizing | 1.0 | D | 0.78 | deleterious | N | 0.460795935 | None | None | N |
T/K | 0.5075 | ambiguous | 0.4998 | ambiguous | -0.667 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
T/L | 0.2431 | likely_benign | 0.2297 | benign | -0.372 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
T/M | 0.1464 | likely_benign | 0.1434 | benign | -0.017 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
T/N | 0.4783 | ambiguous | 0.4846 | ambiguous | -0.828 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | N | 0.486991051 | None | None | N |
T/P | 0.8459 | likely_pathogenic | 0.8575 | pathogenic | -0.487 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.523348691 | None | None | N |
T/Q | 0.5754 | likely_pathogenic | 0.5705 | pathogenic | -1.161 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
T/R | 0.4524 | ambiguous | 0.4444 | ambiguous | -0.375 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
T/S | 0.2749 | likely_benign | 0.2708 | benign | -0.955 | Destabilizing | 0.999 | D | 0.476 | neutral | N | 0.479192482 | None | None | N |
T/V | 0.2181 | likely_benign | 0.2129 | benign | -0.487 | Destabilizing | 0.999 | D | 0.56 | neutral | None | None | None | None | N |
T/W | 0.8634 | likely_pathogenic | 0.8403 | pathogenic | -1.179 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
T/Y | 0.5672 | likely_pathogenic | 0.5497 | ambiguous | -0.843 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.