Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23262 | 70009;70010;70011 | chr2:178576348;178576347;178576346 | chr2:179441075;179441074;179441073 |
N2AB | 21621 | 65086;65087;65088 | chr2:178576348;178576347;178576346 | chr2:179441075;179441074;179441073 |
N2A | 20694 | 62305;62306;62307 | chr2:178576348;178576347;178576346 | chr2:179441075;179441074;179441073 |
N2B | 14197 | 42814;42815;42816 | chr2:178576348;178576347;178576346 | chr2:179441075;179441074;179441073 |
Novex-1 | 14322 | 43189;43190;43191 | chr2:178576348;178576347;178576346 | chr2:179441075;179441074;179441073 |
Novex-2 | 14389 | 43390;43391;43392 | chr2:178576348;178576347;178576346 | chr2:179441075;179441074;179441073 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/C | None | None | 0.997 | N | 0.853 | 0.362 | 0.354610295913 | gnomAD-4.0.0 | 2.84202E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.74815E-06 | 0 | 1.72366E-05 |
G/S | None | None | 0.085 | N | 0.365 | 0.079 | 0.107399877778 | gnomAD-4.0.0 | 7.10502E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.72366E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1992 | likely_benign | 0.2095 | benign | -0.666 | Destabilizing | 0.865 | D | 0.515 | neutral | N | 0.439730017 | None | None | I |
G/C | 0.2953 | likely_benign | 0.2913 | benign | -0.851 | Destabilizing | 0.997 | D | 0.853 | deleterious | N | 0.4752481 | None | None | I |
G/D | 0.5413 | ambiguous | 0.5016 | ambiguous | -1.532 | Destabilizing | 0.978 | D | 0.725 | prob.delet. | N | 0.437612431 | None | None | I |
G/E | 0.4427 | ambiguous | 0.4212 | ambiguous | -1.496 | Destabilizing | 0.968 | D | 0.708 | prob.delet. | None | None | None | None | I |
G/F | 0.7754 | likely_pathogenic | 0.7603 | pathogenic | -0.897 | Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | I |
G/H | 0.6327 | likely_pathogenic | 0.602 | pathogenic | -1.681 | Destabilizing | 0.998 | D | 0.842 | deleterious | None | None | None | None | I |
G/I | 0.4536 | ambiguous | 0.4492 | ambiguous | 0.026 | Stabilizing | 0.983 | D | 0.859 | deleterious | None | None | None | None | I |
G/K | 0.6571 | likely_pathogenic | 0.6122 | pathogenic | -1.311 | Destabilizing | 0.968 | D | 0.739 | prob.delet. | None | None | None | None | I |
G/L | 0.5567 | ambiguous | 0.5534 | ambiguous | 0.026 | Stabilizing | 0.983 | D | 0.803 | deleterious | None | None | None | None | I |
G/M | 0.5715 | likely_pathogenic | 0.5762 | pathogenic | -0.008 | Destabilizing | 0.998 | D | 0.859 | deleterious | None | None | None | None | I |
G/N | 0.387 | ambiguous | 0.3549 | ambiguous | -1.126 | Destabilizing | 0.968 | D | 0.717 | prob.delet. | None | None | None | None | I |
G/P | 0.9796 | likely_pathogenic | 0.976 | pathogenic | -0.16 | Destabilizing | 0.992 | D | 0.817 | deleterious | None | None | None | None | I |
G/Q | 0.4954 | ambiguous | 0.4782 | ambiguous | -1.149 | Destabilizing | 0.547 | D | 0.476 | neutral | None | None | None | None | I |
G/R | 0.5318 | ambiguous | 0.4989 | ambiguous | -1.193 | Destabilizing | 0.957 | D | 0.795 | deleterious | N | 0.430667816 | None | None | I |
G/S | 0.1198 | likely_benign | 0.1218 | benign | -1.385 | Destabilizing | 0.085 | N | 0.365 | neutral | N | 0.376254541 | None | None | I |
G/T | 0.2099 | likely_benign | 0.2152 | benign | -1.248 | Destabilizing | 0.968 | D | 0.751 | deleterious | None | None | None | None | I |
G/V | 0.3211 | likely_benign | 0.3261 | benign | -0.16 | Destabilizing | 0.978 | D | 0.817 | deleterious | N | 0.474728025 | None | None | I |
G/W | 0.694 | likely_pathogenic | 0.6572 | pathogenic | -1.494 | Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | I |
G/Y | 0.6635 | likely_pathogenic | 0.6363 | pathogenic | -0.957 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.