Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23267 | 70024;70025;70026 | chr2:178576333;178576332;178576331 | chr2:179441060;179441059;179441058 |
N2AB | 21626 | 65101;65102;65103 | chr2:178576333;178576332;178576331 | chr2:179441060;179441059;179441058 |
N2A | 20699 | 62320;62321;62322 | chr2:178576333;178576332;178576331 | chr2:179441060;179441059;179441058 |
N2B | 14202 | 42829;42830;42831 | chr2:178576333;178576332;178576331 | chr2:179441060;179441059;179441058 |
Novex-1 | 14327 | 43204;43205;43206 | chr2:178576333;178576332;178576331 | chr2:179441060;179441059;179441058 |
Novex-2 | 14394 | 43405;43406;43407 | chr2:178576333;178576332;178576331 | chr2:179441060;179441059;179441058 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 1.0 | N | 0.649 | 0.413 | 0.382087116544 | gnomAD-4.0.0 | 1.71681E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.0149E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8507 | likely_pathogenic | 0.8365 | pathogenic | -0.688 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | N | 0.49141205 | None | None | I |
D/C | 0.9652 | likely_pathogenic | 0.9619 | pathogenic | -0.334 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
D/E | 0.8424 | likely_pathogenic | 0.8589 | pathogenic | -0.583 | Destabilizing | 1.0 | D | 0.453 | neutral | D | 0.524599484 | None | None | I |
D/F | 0.9787 | likely_pathogenic | 0.9771 | pathogenic | -0.179 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | I |
D/G | 0.7963 | likely_pathogenic | 0.7745 | pathogenic | -1.049 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.501491363 | None | None | I |
D/H | 0.88 | likely_pathogenic | 0.8741 | pathogenic | -0.531 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.500730894 | None | None | I |
D/I | 0.9601 | likely_pathogenic | 0.9571 | pathogenic | 0.273 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
D/K | 0.9594 | likely_pathogenic | 0.9593 | pathogenic | -0.524 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
D/L | 0.9486 | likely_pathogenic | 0.9432 | pathogenic | 0.273 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
D/M | 0.9831 | likely_pathogenic | 0.9813 | pathogenic | 0.72 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
D/N | 0.2206 | likely_benign | 0.2195 | benign | -0.968 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.50580308 | None | None | I |
D/P | 0.975 | likely_pathogenic | 0.9736 | pathogenic | -0.023 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
D/Q | 0.9371 | likely_pathogenic | 0.9357 | pathogenic | -0.808 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
D/R | 0.9447 | likely_pathogenic | 0.942 | pathogenic | -0.343 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
D/S | 0.4706 | ambiguous | 0.448 | ambiguous | -1.24 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
D/T | 0.7675 | likely_pathogenic | 0.7469 | pathogenic | -0.94 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | I |
D/V | 0.901 | likely_pathogenic | 0.8932 | pathogenic | -0.023 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.51158022 | None | None | I |
D/W | 0.9949 | likely_pathogenic | 0.9943 | pathogenic | 0.042 | Stabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | I |
D/Y | 0.861 | likely_pathogenic | 0.8538 | pathogenic | 0.058 | Stabilizing | 1.0 | D | 0.637 | neutral | D | 0.530951923 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.