Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23268 | 70027;70028;70029 | chr2:178576330;178576329;178576328 | chr2:179441057;179441056;179441055 |
N2AB | 21627 | 65104;65105;65106 | chr2:178576330;178576329;178576328 | chr2:179441057;179441056;179441055 |
N2A | 20700 | 62323;62324;62325 | chr2:178576330;178576329;178576328 | chr2:179441057;179441056;179441055 |
N2B | 14203 | 42832;42833;42834 | chr2:178576330;178576329;178576328 | chr2:179441057;179441056;179441055 |
Novex-1 | 14328 | 43207;43208;43209 | chr2:178576330;178576329;178576328 | chr2:179441057;179441056;179441055 |
Novex-2 | 14395 | 43408;43409;43410 | chr2:178576330;178576329;178576328 | chr2:179441057;179441056;179441055 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | rs1201998813 | -0.557 | 1.0 | D | 0.81 | 0.652 | 0.5813134048 | gnomAD-2.1.1 | 4.87E-06 | None | None | None | None | I | None | 0 | 3.75E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/V | rs1201998813 | -0.557 | 1.0 | D | 0.81 | 0.652 | 0.5813134048 | gnomAD-4.0.0 | 1.71243E-06 | None | None | None | None | I | None | 0 | 2.82773E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.9643 | likely_pathogenic | 0.9521 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.52714958 | None | None | I |
G/C | 0.9861 | likely_pathogenic | 0.9844 | pathogenic | -0.649 | Destabilizing | 1.0 | D | 0.785 | deleterious | D | 0.539773333 | None | None | I |
G/D | 0.9956 | likely_pathogenic | 0.995 | pathogenic | -0.616 | Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.503511917 | None | None | I |
G/E | 0.9973 | likely_pathogenic | 0.9969 | pathogenic | -0.737 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | I |
G/F | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -0.933 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
G/H | 0.9979 | likely_pathogenic | 0.9975 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
G/I | 0.9987 | likely_pathogenic | 0.9984 | pathogenic | -0.32 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
G/K | 0.9974 | likely_pathogenic | 0.997 | pathogenic | -0.968 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
G/L | 0.998 | likely_pathogenic | 0.9979 | pathogenic | -0.32 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
G/M | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -0.301 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
G/N | 0.9948 | likely_pathogenic | 0.9953 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
G/P | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -0.316 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
G/Q | 0.997 | likely_pathogenic | 0.9967 | pathogenic | -0.752 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
G/R | 0.9889 | likely_pathogenic | 0.986 | pathogenic | -0.56 | Destabilizing | 1.0 | D | 0.831 | deleterious | N | 0.501954981 | None | None | I |
G/S | 0.944 | likely_pathogenic | 0.9244 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.798 | deleterious | N | 0.508031367 | None | None | I |
G/T | 0.9948 | likely_pathogenic | 0.9932 | pathogenic | -0.757 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
G/V | 0.9969 | likely_pathogenic | 0.996 | pathogenic | -0.316 | Destabilizing | 1.0 | D | 0.81 | deleterious | D | 0.528163538 | None | None | I |
G/W | 0.9959 | likely_pathogenic | 0.9955 | pathogenic | -1.188 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | I |
G/Y | 0.9979 | likely_pathogenic | 0.9974 | pathogenic | -0.809 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.