Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2327070033;70034;70035 chr2:178576324;178576323;178576322chr2:179441051;179441050;179441049
N2AB2162965110;65111;65112 chr2:178576324;178576323;178576322chr2:179441051;179441050;179441049
N2A2070262329;62330;62331 chr2:178576324;178576323;178576322chr2:179441051;179441050;179441049
N2B1420542838;42839;42840 chr2:178576324;178576323;178576322chr2:179441051;179441050;179441049
Novex-11433043213;43214;43215 chr2:178576324;178576323;178576322chr2:179441051;179441050;179441049
Novex-21439743414;43415;43416 chr2:178576324;178576323;178576322chr2:179441051;179441050;179441049
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-57
  • Domain position: 31
  • Structural Position: 33
  • Q(SASA): 0.3805
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs904477168 None 0.994 N 0.785 0.163 0.596456784696 gnomAD-3.1.2 6.58E-06 None None None None I None 0 0 0 0 0 None 0 0 1.47E-05 0 0
L/F rs904477168 None 0.994 N 0.785 0.163 0.596456784696 gnomAD-4.0.0 6.57523E-06 None None None None I None 0 0 None 0 0 None 0 0 1.4708E-05 0 0
L/I None None 0.979 N 0.617 0.173 0.508934680445 gnomAD-4.0.0 2.82019E-06 None None None None I None 0 0 None 0 0 None 0 0 3.65396E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2469 likely_benign 0.2452 benign -1.109 Destabilizing 0.938 D 0.553 neutral None None None None I
L/C 0.4146 ambiguous 0.4121 ambiguous -0.64 Destabilizing 1.0 D 0.755 deleterious None None None None I
L/D 0.7943 likely_pathogenic 0.7873 pathogenic -0.527 Destabilizing 0.991 D 0.809 deleterious None None None None I
L/E 0.4503 ambiguous 0.4652 ambiguous -0.609 Destabilizing 0.991 D 0.804 deleterious None None None None I
L/F 0.2255 likely_benign 0.22 benign -1.076 Destabilizing 0.994 D 0.785 deleterious N 0.466836108 None None I
L/G 0.4808 ambiguous 0.4711 ambiguous -1.324 Destabilizing 0.982 D 0.787 deleterious None None None None I
L/H 0.3226 likely_benign 0.3159 benign -0.587 Destabilizing 0.999 D 0.839 deleterious N 0.493025784 None None I
L/I 0.2485 likely_benign 0.2588 benign -0.645 Destabilizing 0.979 D 0.617 neutral N 0.496546092 None None I
L/K 0.2591 likely_benign 0.2541 benign -0.522 Destabilizing 0.991 D 0.825 deleterious None None None None I
L/M 0.1005 likely_benign 0.1073 benign -0.387 Destabilizing 0.998 D 0.764 deleterious None None None None I
L/N 0.4696 ambiguous 0.4722 ambiguous -0.23 Destabilizing 0.991 D 0.809 deleterious None None None None I
L/P 0.9492 likely_pathogenic 0.9465 pathogenic -0.766 Destabilizing 0.994 D 0.826 deleterious N 0.515651927 None None I
L/Q 0.1578 likely_benign 0.1587 benign -0.523 Destabilizing 0.991 D 0.836 deleterious None None None None I
L/R 0.217 likely_benign 0.203 benign 0.099 Stabilizing 0.988 D 0.826 deleterious N 0.465529751 None None I
L/S 0.253 likely_benign 0.2511 benign -0.766 Destabilizing 0.484 N 0.591 neutral None None None None I
L/T 0.2947 likely_benign 0.293 benign -0.739 Destabilizing 0.938 D 0.721 prob.delet. None None None None I
L/V 0.1784 likely_benign 0.1837 benign -0.766 Destabilizing 0.958 D 0.612 neutral N 0.485251663 None None I
L/W 0.4136 ambiguous 0.3987 ambiguous -1.056 Destabilizing 1.0 D 0.841 deleterious None None None None I
L/Y 0.4423 ambiguous 0.4313 ambiguous -0.805 Destabilizing 0.998 D 0.761 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.