Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23270 | 70033;70034;70035 | chr2:178576324;178576323;178576322 | chr2:179441051;179441050;179441049 |
N2AB | 21629 | 65110;65111;65112 | chr2:178576324;178576323;178576322 | chr2:179441051;179441050;179441049 |
N2A | 20702 | 62329;62330;62331 | chr2:178576324;178576323;178576322 | chr2:179441051;179441050;179441049 |
N2B | 14205 | 42838;42839;42840 | chr2:178576324;178576323;178576322 | chr2:179441051;179441050;179441049 |
Novex-1 | 14330 | 43213;43214;43215 | chr2:178576324;178576323;178576322 | chr2:179441051;179441050;179441049 |
Novex-2 | 14397 | 43414;43415;43416 | chr2:178576324;178576323;178576322 | chr2:179441051;179441050;179441049 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs904477168 | None | 0.994 | N | 0.785 | 0.163 | 0.596456784696 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/F | rs904477168 | None | 0.994 | N | 0.785 | 0.163 | 0.596456784696 | gnomAD-4.0.0 | 6.57523E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4708E-05 | 0 | 0 |
L/I | None | None | 0.979 | N | 0.617 | 0.173 | 0.508934680445 | gnomAD-4.0.0 | 2.82019E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.65396E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2469 | likely_benign | 0.2452 | benign | -1.109 | Destabilizing | 0.938 | D | 0.553 | neutral | None | None | None | None | I |
L/C | 0.4146 | ambiguous | 0.4121 | ambiguous | -0.64 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
L/D | 0.7943 | likely_pathogenic | 0.7873 | pathogenic | -0.527 | Destabilizing | 0.991 | D | 0.809 | deleterious | None | None | None | None | I |
L/E | 0.4503 | ambiguous | 0.4652 | ambiguous | -0.609 | Destabilizing | 0.991 | D | 0.804 | deleterious | None | None | None | None | I |
L/F | 0.2255 | likely_benign | 0.22 | benign | -1.076 | Destabilizing | 0.994 | D | 0.785 | deleterious | N | 0.466836108 | None | None | I |
L/G | 0.4808 | ambiguous | 0.4711 | ambiguous | -1.324 | Destabilizing | 0.982 | D | 0.787 | deleterious | None | None | None | None | I |
L/H | 0.3226 | likely_benign | 0.3159 | benign | -0.587 | Destabilizing | 0.999 | D | 0.839 | deleterious | N | 0.493025784 | None | None | I |
L/I | 0.2485 | likely_benign | 0.2588 | benign | -0.645 | Destabilizing | 0.979 | D | 0.617 | neutral | N | 0.496546092 | None | None | I |
L/K | 0.2591 | likely_benign | 0.2541 | benign | -0.522 | Destabilizing | 0.991 | D | 0.825 | deleterious | None | None | None | None | I |
L/M | 0.1005 | likely_benign | 0.1073 | benign | -0.387 | Destabilizing | 0.998 | D | 0.764 | deleterious | None | None | None | None | I |
L/N | 0.4696 | ambiguous | 0.4722 | ambiguous | -0.23 | Destabilizing | 0.991 | D | 0.809 | deleterious | None | None | None | None | I |
L/P | 0.9492 | likely_pathogenic | 0.9465 | pathogenic | -0.766 | Destabilizing | 0.994 | D | 0.826 | deleterious | N | 0.515651927 | None | None | I |
L/Q | 0.1578 | likely_benign | 0.1587 | benign | -0.523 | Destabilizing | 0.991 | D | 0.836 | deleterious | None | None | None | None | I |
L/R | 0.217 | likely_benign | 0.203 | benign | 0.099 | Stabilizing | 0.988 | D | 0.826 | deleterious | N | 0.465529751 | None | None | I |
L/S | 0.253 | likely_benign | 0.2511 | benign | -0.766 | Destabilizing | 0.484 | N | 0.591 | neutral | None | None | None | None | I |
L/T | 0.2947 | likely_benign | 0.293 | benign | -0.739 | Destabilizing | 0.938 | D | 0.721 | prob.delet. | None | None | None | None | I |
L/V | 0.1784 | likely_benign | 0.1837 | benign | -0.766 | Destabilizing | 0.958 | D | 0.612 | neutral | N | 0.485251663 | None | None | I |
L/W | 0.4136 | ambiguous | 0.3987 | ambiguous | -1.056 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
L/Y | 0.4423 | ambiguous | 0.4313 | ambiguous | -0.805 | Destabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.