Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23271 | 70036;70037;70038 | chr2:178576321;178576320;178576319 | chr2:179441048;179441047;179441046 |
N2AB | 21630 | 65113;65114;65115 | chr2:178576321;178576320;178576319 | chr2:179441048;179441047;179441046 |
N2A | 20703 | 62332;62333;62334 | chr2:178576321;178576320;178576319 | chr2:179441048;179441047;179441046 |
N2B | 14206 | 42841;42842;42843 | chr2:178576321;178576320;178576319 | chr2:179441048;179441047;179441046 |
Novex-1 | 14331 | 43216;43217;43218 | chr2:178576321;178576320;178576319 | chr2:179441048;179441047;179441046 |
Novex-2 | 14398 | 43417;43418;43419 | chr2:178576321;178576320;178576319 | chr2:179441048;179441047;179441046 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs779955364 | -0.363 | 0.822 | N | 0.627 | 0.241 | 0.343101102393 | gnomAD-2.1.1 | 4.82E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.03E-05 | 0 |
E/G | rs779955364 | -0.363 | 0.822 | N | 0.627 | 0.241 | 0.343101102393 | gnomAD-4.0.0 | 1.40882E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.82615E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.129 | likely_benign | 0.1169 | benign | -0.272 | Destabilizing | 0.698 | D | 0.635 | neutral | N | 0.447890927 | None | None | I |
E/C | 0.7874 | likely_pathogenic | 0.7523 | pathogenic | -0.033 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | I |
E/D | 0.0901 | likely_benign | 0.0886 | benign | -0.278 | Destabilizing | 0.006 | N | 0.101 | neutral | N | 0.440367522 | None | None | I |
E/F | 0.7712 | likely_pathogenic | 0.7274 | pathogenic | -0.185 | Destabilizing | 0.993 | D | 0.667 | neutral | None | None | None | None | I |
E/G | 0.1887 | likely_benign | 0.1647 | benign | -0.46 | Destabilizing | 0.822 | D | 0.627 | neutral | N | 0.450643231 | None | None | I |
E/H | 0.4486 | ambiguous | 0.4113 | ambiguous | 0.102 | Stabilizing | 0.978 | D | 0.558 | neutral | None | None | None | None | I |
E/I | 0.3855 | ambiguous | 0.3448 | ambiguous | 0.182 | Stabilizing | 0.978 | D | 0.676 | prob.neutral | None | None | None | None | I |
E/K | 0.1899 | likely_benign | 0.171 | benign | 0.343 | Stabilizing | 0.014 | N | 0.231 | neutral | N | 0.398078182 | None | None | I |
E/L | 0.374 | ambiguous | 0.3357 | benign | 0.182 | Stabilizing | 0.956 | D | 0.62 | neutral | None | None | None | None | I |
E/M | 0.4575 | ambiguous | 0.4207 | ambiguous | 0.203 | Stabilizing | 0.998 | D | 0.662 | neutral | None | None | None | None | I |
E/N | 0.2096 | likely_benign | 0.1925 | benign | 0.078 | Stabilizing | 0.16 | N | 0.23 | neutral | None | None | None | None | I |
E/P | 0.2214 | likely_benign | 0.1836 | benign | 0.051 | Stabilizing | 0.978 | D | 0.641 | neutral | None | None | None | None | I |
E/Q | 0.1458 | likely_benign | 0.1349 | benign | 0.109 | Stabilizing | 0.822 | D | 0.556 | neutral | N | 0.489545548 | None | None | I |
E/R | 0.2901 | likely_benign | 0.2634 | benign | 0.559 | Stabilizing | 0.915 | D | 0.542 | neutral | None | None | None | None | I |
E/S | 0.1882 | likely_benign | 0.1749 | benign | -0.095 | Destabilizing | 0.86 | D | 0.556 | neutral | None | None | None | None | I |
E/T | 0.2186 | likely_benign | 0.2044 | benign | 0.057 | Stabilizing | 0.86 | D | 0.625 | neutral | None | None | None | None | I |
E/V | 0.2177 | likely_benign | 0.1919 | benign | 0.051 | Stabilizing | 0.942 | D | 0.617 | neutral | N | 0.492951213 | None | None | I |
E/W | 0.904 | likely_pathogenic | 0.8741 | pathogenic | -0.061 | Destabilizing | 0.998 | D | 0.746 | deleterious | None | None | None | None | I |
E/Y | 0.6303 | likely_pathogenic | 0.5754 | pathogenic | 0.055 | Stabilizing | 0.993 | D | 0.671 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.