Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23279 | 70060;70061;70062 | chr2:178576297;178576296;178576295 | chr2:179441024;179441023;179441022 |
N2AB | 21638 | 65137;65138;65139 | chr2:178576297;178576296;178576295 | chr2:179441024;179441023;179441022 |
N2A | 20711 | 62356;62357;62358 | chr2:178576297;178576296;178576295 | chr2:179441024;179441023;179441022 |
N2B | 14214 | 42865;42866;42867 | chr2:178576297;178576296;178576295 | chr2:179441024;179441023;179441022 |
Novex-1 | 14339 | 43240;43241;43242 | chr2:178576297;178576296;178576295 | chr2:179441024;179441023;179441022 |
Novex-2 | 14406 | 43441;43442;43443 | chr2:178576297;178576296;178576295 | chr2:179441024;179441023;179441022 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs752879532 | -1.842 | 0.97 | N | 0.689 | 0.298 | 0.291694819147 | gnomAD-4.0.0 | 4.15167E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.43019E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.9826 | likely_pathogenic | 0.9845 | pathogenic | -2.351 | Highly Destabilizing | 0.86 | D | 0.735 | prob.delet. | None | None | None | None | N |
H/C | 0.6381 | likely_pathogenic | 0.6229 | pathogenic | -1.293 | Destabilizing | 0.998 | D | 0.812 | deleterious | None | None | None | None | N |
H/D | 0.9868 | likely_pathogenic | 0.9898 | pathogenic | -2.466 | Highly Destabilizing | 0.99 | D | 0.752 | deleterious | N | 0.518614875 | None | None | N |
H/E | 0.965 | likely_pathogenic | 0.9717 | pathogenic | -2.243 | Highly Destabilizing | 0.926 | D | 0.693 | prob.neutral | None | None | None | None | N |
H/F | 0.8973 | likely_pathogenic | 0.8979 | pathogenic | -0.404 | Destabilizing | 0.754 | D | 0.725 | prob.delet. | None | None | None | None | N |
H/G | 0.9806 | likely_pathogenic | 0.9836 | pathogenic | -2.76 | Highly Destabilizing | 0.926 | D | 0.733 | prob.delet. | None | None | None | None | N |
H/I | 0.965 | likely_pathogenic | 0.9681 | pathogenic | -1.092 | Destabilizing | 0.956 | D | 0.792 | deleterious | None | None | None | None | N |
H/K | 0.7163 | likely_pathogenic | 0.7229 | pathogenic | -1.269 | Destabilizing | 0.978 | D | 0.734 | prob.delet. | None | None | None | None | N |
H/L | 0.8565 | likely_pathogenic | 0.8521 | pathogenic | -1.092 | Destabilizing | 0.698 | D | 0.745 | deleterious | N | 0.422546978 | None | None | N |
H/M | 0.9647 | likely_pathogenic | 0.9663 | pathogenic | -1.167 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
H/N | 0.8677 | likely_pathogenic | 0.8897 | pathogenic | -2.301 | Highly Destabilizing | 0.904 | D | 0.716 | prob.delet. | N | 0.499855756 | None | None | N |
H/P | 0.9914 | likely_pathogenic | 0.9929 | pathogenic | -1.511 | Destabilizing | 0.99 | D | 0.79 | deleterious | N | 0.488812043 | None | None | N |
H/Q | 0.8146 | likely_pathogenic | 0.8338 | pathogenic | -1.936 | Destabilizing | 0.97 | D | 0.689 | prob.neutral | N | 0.466185899 | None | None | N |
H/R | 0.3474 | ambiguous | 0.3541 | ambiguous | -1.224 | Destabilizing | 0.97 | D | 0.685 | prob.neutral | N | 0.409100465 | None | None | N |
H/S | 0.9584 | likely_pathogenic | 0.9621 | pathogenic | -2.46 | Highly Destabilizing | 0.926 | D | 0.73 | prob.delet. | None | None | None | None | N |
H/T | 0.9786 | likely_pathogenic | 0.9804 | pathogenic | -2.115 | Highly Destabilizing | 0.978 | D | 0.75 | deleterious | None | None | None | None | N |
H/V | 0.9471 | likely_pathogenic | 0.9506 | pathogenic | -1.511 | Destabilizing | 0.956 | D | 0.749 | deleterious | None | None | None | None | N |
H/W | 0.7865 | likely_pathogenic | 0.7637 | pathogenic | 0.325 | Stabilizing | 0.994 | D | 0.789 | deleterious | None | None | None | None | N |
H/Y | 0.4859 | ambiguous | 0.4706 | ambiguous | -0.037 | Destabilizing | 0.006 | N | 0.365 | neutral | N | 0.383945731 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.