Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23283 | 70072;70073;70074 | chr2:178576285;178576284;178576283 | chr2:179441012;179441011;179441010 |
N2AB | 21642 | 65149;65150;65151 | chr2:178576285;178576284;178576283 | chr2:179441012;179441011;179441010 |
N2A | 20715 | 62368;62369;62370 | chr2:178576285;178576284;178576283 | chr2:179441012;179441011;179441010 |
N2B | 14218 | 42877;42878;42879 | chr2:178576285;178576284;178576283 | chr2:179441012;179441011;179441010 |
Novex-1 | 14343 | 43252;43253;43254 | chr2:178576285;178576284;178576283 | chr2:179441012;179441011;179441010 |
Novex-2 | 14410 | 43453;43454;43455 | chr2:178576285;178576284;178576283 | chr2:179441012;179441011;179441010 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 1.0 | N | 0.709 | 0.431 | 0.545045102275 | gnomAD-4.0.0 | 6.89601E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.03215E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1867 | likely_benign | 0.226 | benign | -0.285 | Destabilizing | 1.0 | D | 0.521 | neutral | N | 0.477235042 | None | None | N |
G/C | 0.2861 | likely_benign | 0.3248 | benign | -0.968 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
G/D | 0.1531 | likely_benign | 0.1867 | benign | -0.809 | Destabilizing | 0.921 | D | 0.516 | neutral | None | None | None | None | N |
G/E | 0.2005 | likely_benign | 0.2396 | benign | -0.974 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | N | 0.473067532 | None | None | N |
G/F | 0.6969 | likely_pathogenic | 0.7628 | pathogenic | -1.043 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
G/H | 0.4033 | ambiguous | 0.4718 | ambiguous | -0.368 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
G/I | 0.4507 | ambiguous | 0.5351 | ambiguous | -0.518 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
G/K | 0.3857 | ambiguous | 0.448 | ambiguous | -0.836 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
G/L | 0.5442 | ambiguous | 0.6089 | pathogenic | -0.518 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
G/M | 0.5485 | ambiguous | 0.6188 | pathogenic | -0.647 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
G/N | 0.2171 | likely_benign | 0.2612 | benign | -0.495 | Destabilizing | 1.0 | D | 0.572 | neutral | None | None | None | None | N |
G/P | 0.8152 | likely_pathogenic | 0.8663 | pathogenic | -0.413 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
G/Q | 0.3378 | likely_benign | 0.39 | ambiguous | -0.799 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
G/R | 0.3318 | likely_benign | 0.3854 | ambiguous | -0.333 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.494730186 | None | None | N |
G/S | 0.1264 | likely_benign | 0.1458 | benign | -0.605 | Destabilizing | 1.0 | D | 0.56 | neutral | None | None | None | None | N |
G/T | 0.1827 | likely_benign | 0.2327 | benign | -0.71 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
G/V | 0.3301 | likely_benign | 0.4023 | ambiguous | -0.413 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.484641329 | None | None | N |
G/W | 0.5508 | ambiguous | 0.6016 | pathogenic | -1.149 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
G/Y | 0.5713 | likely_pathogenic | 0.6375 | pathogenic | -0.839 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.