Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23285 | 70078;70079;70080 | chr2:178576279;178576278;178576277 | chr2:179441006;179441005;179441004 |
N2AB | 21644 | 65155;65156;65157 | chr2:178576279;178576278;178576277 | chr2:179441006;179441005;179441004 |
N2A | 20717 | 62374;62375;62376 | chr2:178576279;178576278;178576277 | chr2:179441006;179441005;179441004 |
N2B | 14220 | 42883;42884;42885 | chr2:178576279;178576278;178576277 | chr2:179441006;179441005;179441004 |
Novex-1 | 14345 | 43258;43259;43260 | chr2:178576279;178576278;178576277 | chr2:179441006;179441005;179441004 |
Novex-2 | 14412 | 43459;43460;43461 | chr2:178576279;178576278;178576277 | chr2:179441006;179441005;179441004 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.22 | N | 0.502 | 0.226 | 0.245660935333 | gnomAD-4.0.0 | 7.56972E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.022E-06 | 0 | 1.66739E-05 |
E/K | rs376870149 | 0.66 | 0.613 | N | 0.549 | 0.228 | None | gnomAD-2.1.1 | 5.93E-05 | None | None | None | None | N | None | 3.35008E-04 | 8.81E-05 | None | 0 | 0 | None | 3.51E-05 | None | 0 | 3.24E-05 | 0 |
E/K | rs376870149 | 0.66 | 0.613 | N | 0.549 | 0.228 | None | gnomAD-3.1.2 | 1.97345E-04 | None | None | None | None | N | None | 6.27837E-04 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 2.07211E-04 | 0 |
E/K | rs376870149 | 0.66 | 0.613 | N | 0.549 | 0.228 | None | 1000 genomes | 3.99361E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
E/K | rs376870149 | 0.66 | 0.613 | N | 0.549 | 0.228 | None | gnomAD-4.0.0 | 6.41997E-05 | None | None | None | None | N | None | 4.83637E-04 | 8.53009E-05 | None | 0 | 2.24014E-05 | None | 0 | 0 | 4.93186E-05 | 2.2412E-05 | 1.61233E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.101 | likely_benign | 0.1046 | benign | 0.03 | Stabilizing | 0.22 | N | 0.556 | neutral | N | 0.496010161 | None | None | N |
E/C | 0.6901 | likely_pathogenic | 0.697 | pathogenic | -0.225 | Destabilizing | 0.968 | D | 0.632 | neutral | None | None | None | None | N |
E/D | 0.0777 | likely_benign | 0.0775 | benign | -0.319 | Destabilizing | None | N | 0.278 | neutral | N | 0.43215347 | None | None | N |
E/F | 0.5996 | likely_pathogenic | 0.6095 | pathogenic | -0.127 | Destabilizing | 0.89 | D | 0.596 | neutral | None | None | None | None | N |
E/G | 0.104 | likely_benign | 0.1061 | benign | -0.045 | Destabilizing | 0.22 | N | 0.502 | neutral | N | 0.463164237 | None | None | N |
E/H | 0.3192 | likely_benign | 0.3156 | benign | 0.522 | Stabilizing | 0.726 | D | 0.621 | neutral | None | None | None | None | N |
E/I | 0.2443 | likely_benign | 0.2462 | benign | 0.164 | Stabilizing | 0.726 | D | 0.595 | neutral | None | None | None | None | N |
E/K | 0.092 | likely_benign | 0.088 | benign | 0.311 | Stabilizing | 0.613 | D | 0.549 | neutral | N | 0.493239215 | None | None | N |
E/L | 0.2551 | likely_benign | 0.2612 | benign | 0.164 | Stabilizing | 0.567 | D | 0.58 | neutral | None | None | None | None | N |
E/M | 0.3013 | likely_benign | 0.3037 | benign | -0.076 | Destabilizing | 0.968 | D | 0.591 | neutral | None | None | None | None | N |
E/N | 0.1493 | likely_benign | 0.1479 | benign | 0.256 | Stabilizing | 0.157 | N | 0.563 | neutral | None | None | None | None | N |
E/P | 0.2833 | likely_benign | 0.2921 | benign | 0.135 | Stabilizing | 0.726 | D | 0.579 | neutral | None | None | None | None | N |
E/Q | 0.1289 | likely_benign | 0.1265 | benign | 0.226 | Stabilizing | 0.417 | N | 0.527 | neutral | N | 0.492719139 | None | None | N |
E/R | 0.1865 | likely_benign | 0.1795 | benign | 0.513 | Stabilizing | 0.567 | D | 0.599 | neutral | None | None | None | None | N |
E/S | 0.1267 | likely_benign | 0.1295 | benign | 0.069 | Stabilizing | 0.157 | N | 0.559 | neutral | None | None | None | None | N |
E/T | 0.1235 | likely_benign | 0.1264 | benign | 0.135 | Stabilizing | 0.272 | N | 0.528 | neutral | None | None | None | None | N |
E/V | 0.1468 | likely_benign | 0.1501 | benign | 0.135 | Stabilizing | 0.667 | D | 0.533 | neutral | N | 0.482984935 | None | None | N |
E/W | 0.804 | likely_pathogenic | 0.8019 | pathogenic | -0.13 | Destabilizing | 0.968 | D | 0.643 | neutral | None | None | None | None | N |
E/Y | 0.4687 | ambiguous | 0.4723 | ambiguous | 0.083 | Stabilizing | 0.89 | D | 0.587 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.