Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23292 | 70099;70100;70101 | chr2:178576258;178576257;178576256 | chr2:179440985;179440984;179440983 |
N2AB | 21651 | 65176;65177;65178 | chr2:178576258;178576257;178576256 | chr2:179440985;179440984;179440983 |
N2A | 20724 | 62395;62396;62397 | chr2:178576258;178576257;178576256 | chr2:179440985;179440984;179440983 |
N2B | 14227 | 42904;42905;42906 | chr2:178576258;178576257;178576256 | chr2:179440985;179440984;179440983 |
Novex-1 | 14352 | 43279;43280;43281 | chr2:178576258;178576257;178576256 | chr2:179440985;179440984;179440983 |
Novex-2 | 14419 | 43480;43481;43482 | chr2:178576258;178576257;178576256 | chr2:179440985;179440984;179440983 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | rs1710041063 | None | 0.879 | N | 0.407 | 0.343 | 0.330331372229 | gnomAD-4.0.0 | 1.59613E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86428E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0746 | likely_benign | 0.0746 | benign | -0.176 | Destabilizing | 0.296 | N | 0.445 | neutral | N | 0.484808945 | None | None | I |
T/C | 0.4284 | ambiguous | 0.3994 | ambiguous | -0.408 | Destabilizing | 0.991 | D | 0.455 | neutral | None | None | None | None | I |
T/D | 0.3416 | ambiguous | 0.3109 | benign | -0.051 | Destabilizing | 0.906 | D | 0.401 | neutral | None | None | None | None | I |
T/E | 0.246 | likely_benign | 0.2232 | benign | -0.145 | Destabilizing | 0.826 | D | 0.401 | neutral | None | None | None | None | I |
T/F | 0.3288 | likely_benign | 0.2821 | benign | -0.873 | Destabilizing | 0.826 | D | 0.512 | neutral | None | None | None | None | I |
T/G | 0.206 | likely_benign | 0.1903 | benign | -0.207 | Destabilizing | 0.826 | D | 0.422 | neutral | None | None | None | None | I |
T/H | 0.2506 | likely_benign | 0.2261 | benign | -0.366 | Destabilizing | 0.991 | D | 0.513 | neutral | None | None | None | None | I |
T/I | 0.2149 | likely_benign | 0.1729 | benign | -0.211 | Destabilizing | 0.007 | N | 0.311 | neutral | N | 0.518766803 | None | None | I |
T/K | 0.1664 | likely_benign | 0.1497 | benign | -0.289 | Destabilizing | 0.782 | D | 0.402 | neutral | N | 0.489601477 | None | None | I |
T/L | 0.131 | likely_benign | 0.1116 | benign | -0.211 | Destabilizing | 0.189 | N | 0.474 | neutral | None | None | None | None | I |
T/M | 0.1185 | likely_benign | 0.1061 | benign | -0.221 | Destabilizing | 0.947 | D | 0.415 | neutral | None | None | None | None | I |
T/N | 0.1391 | likely_benign | 0.1336 | benign | -0.107 | Destabilizing | 0.906 | D | 0.377 | neutral | None | None | None | None | I |
T/P | 0.1067 | likely_benign | 0.1029 | benign | -0.178 | Destabilizing | 0.003 | N | 0.319 | neutral | N | 0.490929628 | None | None | I |
T/Q | 0.1893 | likely_benign | 0.1747 | benign | -0.298 | Destabilizing | 0.906 | D | 0.409 | neutral | None | None | None | None | I |
T/R | 0.1565 | likely_benign | 0.1406 | benign | -0.039 | Destabilizing | 0.879 | D | 0.407 | neutral | N | 0.494737937 | None | None | I |
T/S | 0.0992 | likely_benign | 0.1 | benign | -0.261 | Destabilizing | 0.505 | D | 0.455 | neutral | N | 0.483502223 | None | None | I |
T/V | 0.1506 | likely_benign | 0.1275 | benign | -0.178 | Destabilizing | 0.189 | N | 0.445 | neutral | None | None | None | None | I |
T/W | 0.6262 | likely_pathogenic | 0.5861 | pathogenic | -0.974 | Destabilizing | 0.991 | D | 0.623 | neutral | None | None | None | None | I |
T/Y | 0.3413 | ambiguous | 0.3183 | benign | -0.651 | Destabilizing | 0.906 | D | 0.509 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.