Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23293 | 70102;70103;70104 | chr2:178576255;178576254;178576253 | chr2:179440982;179440981;179440980 |
N2AB | 21652 | 65179;65180;65181 | chr2:178576255;178576254;178576253 | chr2:179440982;179440981;179440980 |
N2A | 20725 | 62398;62399;62400 | chr2:178576255;178576254;178576253 | chr2:179440982;179440981;179440980 |
N2B | 14228 | 42907;42908;42909 | chr2:178576255;178576254;178576253 | chr2:179440982;179440981;179440980 |
Novex-1 | 14353 | 43282;43283;43284 | chr2:178576255;178576254;178576253 | chr2:179440982;179440981;179440980 |
Novex-2 | 14420 | 43483;43484;43485 | chr2:178576255;178576254;178576253 | chr2:179440982;179440981;179440980 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.942 | N | 0.439 | 0.312 | 0.622080263406 | gnomAD-4.0.0 | 1.59617E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43881E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.196 | likely_benign | 0.1893 | benign | -0.305 | Destabilizing | 0.656 | D | 0.375 | neutral | N | 0.474997383 | None | None | I |
G/C | 0.3614 | ambiguous | 0.3285 | benign | -0.955 | Destabilizing | 0.998 | D | 0.57 | neutral | None | None | None | None | I |
G/D | 0.2753 | likely_benign | 0.2528 | benign | -0.544 | Destabilizing | 0.754 | D | 0.359 | neutral | None | None | None | None | I |
G/E | 0.2791 | likely_benign | 0.2552 | benign | -0.69 | Destabilizing | 0.014 | N | 0.282 | neutral | N | 0.445559911 | None | None | I |
G/F | 0.7781 | likely_pathogenic | 0.7331 | pathogenic | -1.051 | Destabilizing | 0.993 | D | 0.541 | neutral | None | None | None | None | I |
G/H | 0.5268 | ambiguous | 0.4677 | ambiguous | -0.394 | Destabilizing | 0.994 | D | 0.473 | neutral | None | None | None | None | I |
G/I | 0.4726 | ambiguous | 0.4522 | ambiguous | -0.567 | Destabilizing | 0.956 | D | 0.544 | neutral | None | None | None | None | I |
G/K | 0.4768 | ambiguous | 0.4224 | ambiguous | -0.611 | Destabilizing | 0.754 | D | 0.441 | neutral | None | None | None | None | I |
G/L | 0.5939 | likely_pathogenic | 0.5426 | ambiguous | -0.567 | Destabilizing | 0.956 | D | 0.515 | neutral | None | None | None | None | I |
G/M | 0.6375 | likely_pathogenic | 0.5929 | pathogenic | -0.696 | Destabilizing | 0.998 | D | 0.537 | neutral | None | None | None | None | I |
G/N | 0.34 | likely_benign | 0.3109 | benign | -0.32 | Destabilizing | 0.86 | D | 0.383 | neutral | None | None | None | None | I |
G/P | 0.7448 | likely_pathogenic | 0.7205 | pathogenic | -0.459 | Destabilizing | 0.978 | D | 0.477 | neutral | None | None | None | None | I |
G/Q | 0.3991 | ambiguous | 0.3543 | ambiguous | -0.556 | Destabilizing | 0.193 | N | 0.283 | neutral | None | None | None | None | I |
G/R | 0.3953 | ambiguous | 0.3488 | ambiguous | -0.26 | Destabilizing | 0.942 | D | 0.439 | neutral | N | 0.477133612 | None | None | I |
G/S | 0.1488 | likely_benign | 0.1427 | benign | -0.479 | Destabilizing | 0.754 | D | 0.353 | neutral | None | None | None | None | I |
G/T | 0.2406 | likely_benign | 0.2284 | benign | -0.563 | Destabilizing | 0.076 | N | 0.284 | neutral | None | None | None | None | I |
G/V | 0.3195 | likely_benign | 0.3032 | benign | -0.459 | Destabilizing | 0.942 | D | 0.517 | neutral | N | 0.43799922 | None | None | I |
G/W | 0.6613 | likely_pathogenic | 0.609 | pathogenic | -1.132 | Destabilizing | 0.998 | D | 0.544 | neutral | None | None | None | None | I |
G/Y | 0.6335 | likely_pathogenic | 0.5667 | pathogenic | -0.847 | Destabilizing | 0.993 | D | 0.551 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.