Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23294 | 70105;70106;70107 | chr2:178576252;178576251;178576250 | chr2:179440979;179440978;179440977 |
N2AB | 21653 | 65182;65183;65184 | chr2:178576252;178576251;178576250 | chr2:179440979;179440978;179440977 |
N2A | 20726 | 62401;62402;62403 | chr2:178576252;178576251;178576250 | chr2:179440979;179440978;179440977 |
N2B | 14229 | 42910;42911;42912 | chr2:178576252;178576251;178576250 | chr2:179440979;179440978;179440977 |
Novex-1 | 14354 | 43285;43286;43287 | chr2:178576252;178576251;178576250 | chr2:179440979;179440978;179440977 |
Novex-2 | 14421 | 43486;43487;43488 | chr2:178576252;178576251;178576250 | chr2:179440979;179440978;179440977 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.007 | N | 0.233 | 0.251 | 0.301789629655 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0778 | likely_benign | 0.079 | benign | -0.189 | Destabilizing | 0.003 | N | 0.096 | neutral | N | 0.487443819 | None | None | I |
T/C | 0.4212 | ambiguous | 0.3931 | ambiguous | -0.409 | Destabilizing | 0.94 | D | 0.354 | neutral | None | None | None | None | I |
T/D | 0.3174 | likely_benign | 0.3048 | benign | -0.049 | Destabilizing | 0.418 | N | 0.342 | neutral | None | None | None | None | I |
T/E | 0.2416 | likely_benign | 0.2371 | benign | -0.144 | Destabilizing | 0.418 | N | 0.352 | neutral | None | None | None | None | I |
T/F | 0.2741 | likely_benign | 0.2485 | benign | -0.88 | Destabilizing | 0.002 | N | 0.282 | neutral | None | None | None | None | I |
T/G | 0.2102 | likely_benign | 0.1907 | benign | -0.222 | Destabilizing | 0.129 | N | 0.349 | neutral | None | None | None | None | I |
T/H | 0.2322 | likely_benign | 0.2147 | benign | -0.399 | Destabilizing | 0.836 | D | 0.358 | neutral | None | None | None | None | I |
T/I | 0.2023 | likely_benign | 0.1969 | benign | -0.22 | Destabilizing | 0.007 | N | 0.233 | neutral | N | 0.452891315 | None | None | I |
T/K | 0.1709 | likely_benign | 0.1646 | benign | -0.304 | Destabilizing | 0.418 | N | 0.353 | neutral | None | None | None | None | I |
T/L | 0.1099 | likely_benign | 0.1049 | benign | -0.22 | Destabilizing | 0.129 | N | 0.396 | neutral | None | None | None | None | I |
T/M | 0.0981 | likely_benign | 0.1015 | benign | -0.218 | Destabilizing | 0.836 | D | 0.367 | neutral | None | None | None | None | I |
T/N | 0.1071 | likely_benign | 0.1078 | benign | -0.116 | Destabilizing | 0.351 | N | 0.321 | neutral | N | 0.499199608 | None | None | I |
T/P | 0.0929 | likely_benign | 0.1008 | benign | -0.189 | Destabilizing | 0.002 | N | 0.236 | neutral | N | 0.469839493 | None | None | I |
T/Q | 0.184 | likely_benign | 0.1807 | benign | -0.311 | Destabilizing | 0.716 | D | 0.443 | neutral | None | None | None | None | I |
T/R | 0.1785 | likely_benign | 0.1731 | benign | -0.06 | Destabilizing | 0.716 | D | 0.455 | neutral | None | None | None | None | I |
T/S | 0.1001 | likely_benign | 0.095 | benign | -0.268 | Destabilizing | 0.003 | N | 0.095 | neutral | N | 0.487617177 | None | None | I |
T/V | 0.1516 | likely_benign | 0.1441 | benign | -0.189 | Destabilizing | 0.129 | N | 0.259 | neutral | None | None | None | None | I |
T/W | 0.6371 | likely_pathogenic | 0.5995 | pathogenic | -0.975 | Destabilizing | 0.983 | D | 0.336 | neutral | None | None | None | None | I |
T/Y | 0.297 | likely_benign | 0.2744 | benign | -0.655 | Destabilizing | 0.01 | N | 0.281 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.