Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23303 | 70132;70133;70134 | chr2:178576225;178576224;178576223 | chr2:179440952;179440951;179440950 |
N2AB | 21662 | 65209;65210;65211 | chr2:178576225;178576224;178576223 | chr2:179440952;179440951;179440950 |
N2A | 20735 | 62428;62429;62430 | chr2:178576225;178576224;178576223 | chr2:179440952;179440951;179440950 |
N2B | 14238 | 42937;42938;42939 | chr2:178576225;178576224;178576223 | chr2:179440952;179440951;179440950 |
Novex-1 | 14363 | 43312;43313;43314 | chr2:178576225;178576224;178576223 | chr2:179440952;179440951;179440950 |
Novex-2 | 14430 | 43513;43514;43515 | chr2:178576225;178576224;178576223 | chr2:179440952;179440951;179440950 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.999 | N | 0.854 | 0.713 | 0.816208988277 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.43013E-04 | 0 |
V/L | None | None | 0.948 | N | 0.563 | 0.24 | 0.565722134273 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7386 | likely_pathogenic | 0.7037 | pathogenic | -1.788 | Destabilizing | 0.994 | D | 0.666 | neutral | N | 0.478986697 | None | None | N |
V/C | 0.933 | likely_pathogenic | 0.9199 | pathogenic | -1.242 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
V/D | 0.9928 | likely_pathogenic | 0.9919 | pathogenic | -2.578 | Highly Destabilizing | 0.999 | D | 0.854 | deleterious | N | 0.505484743 | None | None | N |
V/E | 0.9797 | likely_pathogenic | 0.9763 | pathogenic | -2.314 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/F | 0.8156 | likely_pathogenic | 0.7697 | pathogenic | -1.043 | Destabilizing | 0.998 | D | 0.809 | deleterious | N | 0.499480354 | None | None | N |
V/G | 0.9296 | likely_pathogenic | 0.9235 | pathogenic | -2.354 | Highly Destabilizing | 0.999 | D | 0.86 | deleterious | D | 0.532743257 | None | None | N |
V/H | 0.9908 | likely_pathogenic | 0.9885 | pathogenic | -2.246 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
V/I | 0.1003 | likely_benign | 0.0937 | benign | -0.188 | Destabilizing | 0.543 | D | 0.222 | neutral | N | 0.483331652 | None | None | N |
V/K | 0.9779 | likely_pathogenic | 0.9742 | pathogenic | -1.466 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
V/L | 0.5511 | ambiguous | 0.4737 | ambiguous | -0.188 | Destabilizing | 0.948 | D | 0.563 | neutral | N | 0.458315777 | None | None | N |
V/M | 0.6057 | likely_pathogenic | 0.519 | ambiguous | -0.251 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/N | 0.9768 | likely_pathogenic | 0.9736 | pathogenic | -1.907 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
V/P | 0.9867 | likely_pathogenic | 0.9866 | pathogenic | -0.695 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
V/Q | 0.9697 | likely_pathogenic | 0.9624 | pathogenic | -1.667 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/R | 0.9669 | likely_pathogenic | 0.9637 | pathogenic | -1.509 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/S | 0.9094 | likely_pathogenic | 0.8982 | pathogenic | -2.48 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
V/T | 0.8437 | likely_pathogenic | 0.8202 | pathogenic | -2.058 | Highly Destabilizing | 0.996 | D | 0.714 | prob.delet. | None | None | None | None | N |
V/W | 0.996 | likely_pathogenic | 0.9947 | pathogenic | -1.622 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/Y | 0.9819 | likely_pathogenic | 0.9766 | pathogenic | -1.155 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.