Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23305 | 70138;70139;70140 | chr2:178576219;178576218;178576217 | chr2:179440946;179440945;179440944 |
N2AB | 21664 | 65215;65216;65217 | chr2:178576219;178576218;178576217 | chr2:179440946;179440945;179440944 |
N2A | 20737 | 62434;62435;62436 | chr2:178576219;178576218;178576217 | chr2:179440946;179440945;179440944 |
N2B | 14240 | 42943;42944;42945 | chr2:178576219;178576218;178576217 | chr2:179440946;179440945;179440944 |
Novex-1 | 14365 | 43318;43319;43320 | chr2:178576219;178576218;178576217 | chr2:179440946;179440945;179440944 |
Novex-2 | 14432 | 43519;43520;43521 | chr2:178576219;178576218;178576217 | chr2:179440946;179440945;179440944 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | None | N | 0.163 | 0.176 | 0.219573609325 | gnomAD-4.0.0 | 2.05367E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69921E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1426 | likely_benign | 0.1362 | benign | -0.109 | Destabilizing | 0.012 | N | 0.247 | neutral | N | 0.508363383 | None | None | N |
D/C | 0.5128 | ambiguous | 0.489 | ambiguous | -0.189 | Destabilizing | 0.864 | D | 0.36 | neutral | None | None | None | None | N |
D/E | 0.1371 | likely_benign | 0.1311 | benign | -0.276 | Destabilizing | None | N | 0.155 | neutral | N | 0.44662149 | None | None | N |
D/F | 0.5217 | ambiguous | 0.5271 | ambiguous | -0.065 | Destabilizing | 0.356 | N | 0.389 | neutral | None | None | None | None | N |
D/G | 0.1157 | likely_benign | 0.1213 | benign | -0.266 | Destabilizing | None | N | 0.167 | neutral | N | 0.369963287 | None | None | N |
D/H | 0.1939 | likely_benign | 0.2023 | benign | 0.432 | Stabilizing | None | N | 0.189 | neutral | N | 0.463188453 | None | None | N |
D/I | 0.3881 | ambiguous | 0.3661 | ambiguous | 0.248 | Stabilizing | 0.356 | N | 0.429 | neutral | None | None | None | None | N |
D/K | 0.2914 | likely_benign | 0.2946 | benign | 0.304 | Stabilizing | None | N | 0.153 | neutral | None | None | None | None | N |
D/L | 0.3318 | likely_benign | 0.32 | benign | 0.248 | Stabilizing | 0.072 | N | 0.343 | neutral | None | None | None | None | N |
D/M | 0.509 | ambiguous | 0.4917 | ambiguous | 0.088 | Stabilizing | 0.628 | D | 0.384 | neutral | None | None | None | None | N |
D/N | 0.069 | likely_benign | 0.0711 | benign | 0.019 | Stabilizing | None | N | 0.163 | neutral | N | 0.385282243 | None | None | N |
D/P | 0.7593 | likely_pathogenic | 0.695 | pathogenic | 0.15 | Stabilizing | None | N | 0.208 | neutral | None | None | None | None | N |
D/Q | 0.2373 | likely_benign | 0.2354 | benign | 0.039 | Stabilizing | 0.038 | N | 0.27 | neutral | None | None | None | None | N |
D/R | 0.3507 | ambiguous | 0.3558 | ambiguous | 0.596 | Stabilizing | 0.038 | N | 0.294 | neutral | None | None | None | None | N |
D/S | 0.0995 | likely_benign | 0.098 | benign | -0.092 | Destabilizing | 0.016 | N | 0.22 | neutral | None | None | None | None | N |
D/T | 0.211 | likely_benign | 0.2037 | benign | 0.033 | Stabilizing | 0.031 | N | 0.247 | neutral | None | None | None | None | N |
D/V | 0.2434 | likely_benign | 0.2272 | benign | 0.15 | Stabilizing | 0.055 | N | 0.387 | neutral | N | 0.485401797 | None | None | N |
D/W | 0.8616 | likely_pathogenic | 0.8671 | pathogenic | 0.03 | Stabilizing | 0.864 | D | 0.373 | neutral | None | None | None | None | N |
D/Y | 0.2133 | likely_benign | 0.2217 | benign | 0.168 | Stabilizing | 0.171 | N | 0.417 | neutral | N | 0.473792002 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.