Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23322 | 70189;70190;70191 | chr2:178576168;178576167;178576166 | chr2:179440895;179440894;179440893 |
N2AB | 21681 | 65266;65267;65268 | chr2:178576168;178576167;178576166 | chr2:179440895;179440894;179440893 |
N2A | 20754 | 62485;62486;62487 | chr2:178576168;178576167;178576166 | chr2:179440895;179440894;179440893 |
N2B | 14257 | 42994;42995;42996 | chr2:178576168;178576167;178576166 | chr2:179440895;179440894;179440893 |
Novex-1 | 14382 | 43369;43370;43371 | chr2:178576168;178576167;178576166 | chr2:179440895;179440894;179440893 |
Novex-2 | 14449 | 43570;43571;43572 | chr2:178576168;178576167;178576166 | chr2:179440895;179440894;179440893 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.989 | N | 0.448 | 0.436 | 0.482429249588 | gnomAD-4.0.0 | 1.59303E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43501E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.344 | ambiguous | 0.375 | ambiguous | -0.702 | Destabilizing | 0.998 | D | 0.411 | neutral | None | None | None | None | I |
A/D | 0.546 | ambiguous | 0.6206 | pathogenic | -0.421 | Destabilizing | 0.728 | D | 0.516 | neutral | None | None | None | None | I |
A/E | 0.2983 | likely_benign | 0.3496 | ambiguous | -0.578 | Destabilizing | 0.022 | N | 0.234 | neutral | N | 0.512592979 | None | None | I |
A/F | 0.2915 | likely_benign | 0.3402 | ambiguous | -0.849 | Destabilizing | 0.974 | D | 0.608 | neutral | None | None | None | None | I |
A/G | 0.2236 | likely_benign | 0.2329 | benign | -0.257 | Destabilizing | 0.891 | D | 0.33 | neutral | N | 0.487369248 | None | None | I |
A/H | 0.4978 | ambiguous | 0.546 | ambiguous | -0.25 | Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | I |
A/I | 0.1408 | likely_benign | 0.1697 | benign | -0.3 | Destabilizing | 0.728 | D | 0.448 | neutral | None | None | None | None | I |
A/K | 0.4343 | ambiguous | 0.4898 | ambiguous | -0.55 | Destabilizing | 0.842 | D | 0.379 | neutral | None | None | None | None | I |
A/L | 0.1606 | likely_benign | 0.1932 | benign | -0.3 | Destabilizing | 0.728 | D | 0.357 | neutral | None | None | None | None | I |
A/M | 0.1554 | likely_benign | 0.1831 | benign | -0.372 | Destabilizing | 0.993 | D | 0.453 | neutral | None | None | None | None | I |
A/N | 0.3845 | ambiguous | 0.445 | ambiguous | -0.199 | Destabilizing | 0.974 | D | 0.591 | neutral | None | None | None | None | I |
A/P | 0.8706 | likely_pathogenic | 0.9 | pathogenic | -0.239 | Destabilizing | 0.989 | D | 0.448 | neutral | N | 0.511922615 | None | None | I |
A/Q | 0.3459 | ambiguous | 0.3879 | ambiguous | -0.489 | Destabilizing | 0.949 | D | 0.44 | neutral | None | None | None | None | I |
A/R | 0.3701 | ambiguous | 0.4151 | ambiguous | -0.072 | Destabilizing | 0.949 | D | 0.445 | neutral | None | None | None | None | I |
A/S | 0.1306 | likely_benign | 0.1431 | benign | -0.404 | Destabilizing | 0.801 | D | 0.36 | neutral | N | 0.521079177 | None | None | I |
A/T | 0.1056 | likely_benign | 0.1167 | benign | -0.482 | Destabilizing | 0.801 | D | 0.325 | neutral | N | 0.492804402 | None | None | I |
A/V | 0.0737 | likely_benign | 0.0802 | benign | -0.239 | Destabilizing | 0.012 | N | 0.279 | neutral | N | 0.478115046 | None | None | I |
A/W | 0.7729 | likely_pathogenic | 0.8237 | pathogenic | -0.979 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | I |
A/Y | 0.4845 | ambiguous | 0.5521 | ambiguous | -0.628 | Destabilizing | 0.991 | D | 0.607 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.