Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23324 | 70195;70196;70197 | chr2:178576162;178576161;178576160 | chr2:179440889;179440888;179440887 |
N2AB | 21683 | 65272;65273;65274 | chr2:178576162;178576161;178576160 | chr2:179440889;179440888;179440887 |
N2A | 20756 | 62491;62492;62493 | chr2:178576162;178576161;178576160 | chr2:179440889;179440888;179440887 |
N2B | 14259 | 43000;43001;43002 | chr2:178576162;178576161;178576160 | chr2:179440889;179440888;179440887 |
Novex-1 | 14384 | 43375;43376;43377 | chr2:178576162;178576161;178576160 | chr2:179440889;179440888;179440887 |
Novex-2 | 14451 | 43576;43577;43578 | chr2:178576162;178576161;178576160 | chr2:179440889;179440888;179440887 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | None | N | 0.25 | 0.089 | 0.388174495139 | gnomAD-4.0.0 | 1.36898E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79942E-06 | 0 | 0 |
V/F | None | None | 0.171 | N | 0.625 | 0.103 | 0.629781192331 | gnomAD-4.0.0 | 3.18564E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72164E-06 | 0 | 0 |
V/I | rs1710011007 | None | None | N | 0.234 | 0.053 | 0.315903272564 | gnomAD-4.0.0 | 1.59282E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4348E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0967 | likely_benign | 0.093 | benign | -0.859 | Destabilizing | None | N | 0.25 | neutral | N | 0.446173199 | None | None | I |
V/C | 0.5428 | ambiguous | 0.4898 | ambiguous | -0.749 | Destabilizing | 0.676 | D | 0.603 | neutral | None | None | None | None | I |
V/D | 0.3112 | likely_benign | 0.292 | benign | -0.378 | Destabilizing | 0.029 | N | 0.642 | neutral | N | 0.500487687 | None | None | I |
V/E | 0.1973 | likely_benign | 0.1901 | benign | -0.468 | Destabilizing | None | N | 0.515 | neutral | None | None | None | None | I |
V/F | 0.134 | likely_benign | 0.1223 | benign | -0.9 | Destabilizing | 0.171 | N | 0.625 | neutral | N | 0.497255381 | None | None | I |
V/G | 0.2056 | likely_benign | 0.1988 | benign | -1.049 | Destabilizing | 0.029 | N | 0.607 | neutral | N | 0.519766881 | None | None | I |
V/H | 0.4174 | ambiguous | 0.3781 | ambiguous | -0.509 | Destabilizing | 0.676 | D | 0.641 | neutral | None | None | None | None | I |
V/I | 0.0651 | likely_benign | 0.0638 | benign | -0.491 | Destabilizing | None | N | 0.234 | neutral | N | 0.468529984 | None | None | I |
V/K | 0.2259 | likely_benign | 0.2069 | benign | -0.612 | Destabilizing | 0.038 | N | 0.614 | neutral | None | None | None | None | I |
V/L | 0.1277 | likely_benign | 0.1142 | benign | -0.491 | Destabilizing | None | N | 0.231 | neutral | N | 0.433358618 | None | None | I |
V/M | 0.1065 | likely_benign | 0.102 | benign | -0.399 | Destabilizing | 0.214 | N | 0.604 | neutral | None | None | None | None | I |
V/N | 0.2239 | likely_benign | 0.2028 | benign | -0.335 | Destabilizing | 0.214 | N | 0.641 | neutral | None | None | None | None | I |
V/P | 0.2473 | likely_benign | 0.2216 | benign | -0.577 | Destabilizing | 0.356 | N | 0.637 | neutral | None | None | None | None | I |
V/Q | 0.2235 | likely_benign | 0.2132 | benign | -0.596 | Destabilizing | 0.12 | N | 0.641 | neutral | None | None | None | None | I |
V/R | 0.2029 | likely_benign | 0.1835 | benign | -0.055 | Destabilizing | 0.214 | N | 0.641 | neutral | None | None | None | None | I |
V/S | 0.1508 | likely_benign | 0.1434 | benign | -0.811 | Destabilizing | 0.038 | N | 0.584 | neutral | None | None | None | None | I |
V/T | 0.1079 | likely_benign | 0.0992 | benign | -0.795 | Destabilizing | 0.001 | N | 0.264 | neutral | None | None | None | None | I |
V/W | 0.6359 | likely_pathogenic | 0.6035 | pathogenic | -0.946 | Destabilizing | 0.864 | D | 0.657 | neutral | None | None | None | None | I |
V/Y | 0.4032 | ambiguous | 0.3689 | ambiguous | -0.661 | Destabilizing | 0.356 | N | 0.614 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.