Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23327 | 70204;70205;70206 | chr2:178576153;178576152;178576151 | chr2:179440880;179440879;179440878 |
N2AB | 21686 | 65281;65282;65283 | chr2:178576153;178576152;178576151 | chr2:179440880;179440879;179440878 |
N2A | 20759 | 62500;62501;62502 | chr2:178576153;178576152;178576151 | chr2:179440880;179440879;179440878 |
N2B | 14262 | 43009;43010;43011 | chr2:178576153;178576152;178576151 | chr2:179440880;179440879;179440878 |
Novex-1 | 14387 | 43384;43385;43386 | chr2:178576153;178576152;178576151 | chr2:179440880;179440879;179440878 |
Novex-2 | 14454 | 43585;43586;43587 | chr2:178576153;178576152;178576151 | chr2:179440880;179440879;179440878 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | N | 0.726 | 0.375 | 0.339316883193 | gnomAD-4.0.0 | 3.18491E-06 | None | None | None | None | I | None | 1.13225E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0975 | likely_benign | 0.0925 | benign | -1.097 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.469327642 | None | None | I |
P/C | 0.5901 | likely_pathogenic | 0.5637 | ambiguous | -0.726 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
P/D | 0.6984 | likely_pathogenic | 0.6948 | pathogenic | -0.891 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
P/E | 0.5739 | likely_pathogenic | 0.5614 | ambiguous | -0.968 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
P/F | 0.5827 | likely_pathogenic | 0.5707 | pathogenic | -1.025 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
P/G | 0.4873 | ambiguous | 0.4615 | ambiguous | -1.318 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
P/H | 0.3168 | likely_benign | 0.2968 | benign | -0.838 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
P/I | 0.6363 | likely_pathogenic | 0.6243 | pathogenic | -0.629 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
P/K | 0.6667 | likely_pathogenic | 0.6329 | pathogenic | -0.947 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
P/L | 0.3237 | likely_benign | 0.3225 | benign | -0.629 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.532679308 | None | None | I |
P/M | 0.5124 | ambiguous | 0.507 | ambiguous | -0.464 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
P/N | 0.5838 | likely_pathogenic | 0.5772 | pathogenic | -0.604 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
P/Q | 0.4217 | ambiguous | 0.4016 | ambiguous | -0.871 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.516602969 | None | None | I |
P/R | 0.5383 | ambiguous | 0.5052 | ambiguous | -0.342 | Destabilizing | 1.0 | D | 0.834 | deleterious | D | 0.534200245 | None | None | I |
P/S | 0.1948 | likely_benign | 0.1971 | benign | -1.025 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | N | 0.501599359 | None | None | I |
P/T | 0.2322 | likely_benign | 0.2304 | benign | -1.005 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.507955688 | None | None | I |
P/V | 0.4342 | ambiguous | 0.4274 | ambiguous | -0.75 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
P/W | 0.771 | likely_pathogenic | 0.7508 | pathogenic | -1.111 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
P/Y | 0.5634 | ambiguous | 0.5433 | ambiguous | -0.854 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.