Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23331 | 70216;70217;70218 | chr2:178576141;178576140;178576139 | chr2:179440868;179440867;179440866 |
N2AB | 21690 | 65293;65294;65295 | chr2:178576141;178576140;178576139 | chr2:179440868;179440867;179440866 |
N2A | 20763 | 62512;62513;62514 | chr2:178576141;178576140;178576139 | chr2:179440868;179440867;179440866 |
N2B | 14266 | 43021;43022;43023 | chr2:178576141;178576140;178576139 | chr2:179440868;179440867;179440866 |
Novex-1 | 14391 | 43396;43397;43398 | chr2:178576141;178576140;178576139 | chr2:179440868;179440867;179440866 |
Novex-2 | 14458 | 43597;43598;43599 | chr2:178576141;178576140;178576139 | chr2:179440868;179440867;179440866 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.058 | N | 0.505 | 0.146 | 0.355658859761 | gnomAD-4.0.0 | 1.5921E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85961E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.075 | likely_benign | 0.0723 | benign | -0.811 | Destabilizing | 0.012 | N | 0.344 | neutral | N | 0.449549939 | None | None | I |
P/C | 0.404 | ambiguous | 0.3961 | ambiguous | -0.759 | Destabilizing | 0.685 | D | 0.507 | neutral | None | None | None | None | I |
P/D | 0.2912 | likely_benign | 0.2884 | benign | -0.554 | Destabilizing | None | N | 0.135 | neutral | None | None | None | None | I |
P/E | 0.1938 | likely_benign | 0.1931 | benign | -0.623 | Destabilizing | None | N | 0.125 | neutral | None | None | None | None | I |
P/F | 0.5725 | likely_pathogenic | 0.5502 | ambiguous | -0.779 | Destabilizing | 0.366 | N | 0.522 | neutral | None | None | None | None | I |
P/G | 0.181 | likely_benign | 0.1879 | benign | -1.017 | Destabilizing | 0.039 | N | 0.395 | neutral | None | None | None | None | I |
P/H | 0.1763 | likely_benign | 0.1623 | benign | -0.478 | Destabilizing | 0.366 | N | 0.433 | neutral | None | None | None | None | I |
P/I | 0.4139 | ambiguous | 0.3885 | ambiguous | -0.391 | Destabilizing | 0.221 | N | 0.614 | neutral | None | None | None | None | I |
P/K | 0.1712 | likely_benign | 0.1626 | benign | -0.749 | Destabilizing | 0.039 | N | 0.333 | neutral | None | None | None | None | I |
P/L | 0.163 | likely_benign | 0.1505 | benign | -0.391 | Destabilizing | 0.058 | N | 0.505 | neutral | N | 0.488108327 | None | None | I |
P/M | 0.3212 | likely_benign | 0.3038 | benign | -0.435 | Destabilizing | 0.869 | D | 0.417 | neutral | None | None | None | None | I |
P/N | 0.2207 | likely_benign | 0.217 | benign | -0.537 | Destabilizing | 0.039 | N | 0.401 | neutral | None | None | None | None | I |
P/Q | 0.1274 | likely_benign | 0.1213 | benign | -0.739 | Destabilizing | 0.058 | N | 0.398 | neutral | N | 0.496226378 | None | None | I |
P/R | 0.144 | likely_benign | 0.1328 | benign | -0.2 | Destabilizing | 0.177 | N | 0.493 | neutral | N | 0.480240918 | None | None | I |
P/S | 0.0988 | likely_benign | 0.0942 | benign | -0.954 | Destabilizing | None | N | 0.214 | neutral | N | 0.415264007 | None | None | I |
P/T | 0.0942 | likely_benign | 0.0874 | benign | -0.913 | Destabilizing | 0.03 | N | 0.38 | neutral | N | 0.435428636 | None | None | I |
P/V | 0.2484 | likely_benign | 0.2346 | benign | -0.495 | Destabilizing | 0.075 | N | 0.418 | neutral | None | None | None | None | I |
P/W | 0.6565 | likely_pathogenic | 0.641 | pathogenic | -0.885 | Destabilizing | 0.869 | D | 0.583 | neutral | None | None | None | None | I |
P/Y | 0.4672 | ambiguous | 0.4514 | ambiguous | -0.598 | Destabilizing | 0.366 | N | 0.521 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.