Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23333 | 70222;70223;70224 | chr2:178576135;178576134;178576133 | chr2:179440862;179440861;179440860 |
N2AB | 21692 | 65299;65300;65301 | chr2:178576135;178576134;178576133 | chr2:179440862;179440861;179440860 |
N2A | 20765 | 62518;62519;62520 | chr2:178576135;178576134;178576133 | chr2:179440862;179440861;179440860 |
N2B | 14268 | 43027;43028;43029 | chr2:178576135;178576134;178576133 | chr2:179440862;179440861;179440860 |
Novex-1 | 14393 | 43402;43403;43404 | chr2:178576135;178576134;178576133 | chr2:179440862;179440861;179440860 |
Novex-2 | 14460 | 43603;43604;43605 | chr2:178576135;178576134;178576133 | chr2:179440862;179440861;179440860 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.982 | N | 0.426 | 0.311 | 0.661867001231 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
V/F | rs1710003146 | None | 0.995 | N | 0.777 | 0.299 | 0.675861982728 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2024 | likely_benign | 0.2058 | benign | -2.021 | Highly Destabilizing | 0.982 | D | 0.426 | neutral | N | 0.489881983 | None | None | N |
V/C | 0.7409 | likely_pathogenic | 0.7475 | pathogenic | -1.341 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
V/D | 0.6961 | likely_pathogenic | 0.7129 | pathogenic | -2.714 | Highly Destabilizing | 0.999 | D | 0.83 | deleterious | N | 0.510201327 | None | None | N |
V/E | 0.5114 | ambiguous | 0.5293 | ambiguous | -2.529 | Highly Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
V/F | 0.33 | likely_benign | 0.3416 | ambiguous | -1.318 | Destabilizing | 0.995 | D | 0.777 | deleterious | N | 0.509681252 | None | None | N |
V/G | 0.4461 | ambiguous | 0.4508 | ambiguous | -2.519 | Highly Destabilizing | 0.999 | D | 0.821 | deleterious | N | 0.510027969 | None | None | N |
V/H | 0.7517 | likely_pathogenic | 0.7696 | pathogenic | -2.293 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/I | 0.0809 | likely_benign | 0.0842 | benign | -0.643 | Destabilizing | 0.429 | N | 0.252 | neutral | N | 0.4860681 | None | None | N |
V/K | 0.5095 | ambiguous | 0.5386 | ambiguous | -1.782 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
V/L | 0.3475 | ambiguous | 0.3446 | ambiguous | -0.643 | Destabilizing | 0.921 | D | 0.412 | neutral | N | 0.4881484 | None | None | N |
V/M | 0.1738 | likely_benign | 0.182 | benign | -0.463 | Destabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | N |
V/N | 0.535 | ambiguous | 0.5549 | ambiguous | -1.994 | Destabilizing | 0.999 | D | 0.83 | deleterious | None | None | None | None | N |
V/P | 0.9089 | likely_pathogenic | 0.9096 | pathogenic | -1.075 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
V/Q | 0.5052 | ambiguous | 0.5225 | ambiguous | -1.913 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
V/R | 0.4874 | ambiguous | 0.5124 | ambiguous | -1.499 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
V/S | 0.3721 | ambiguous | 0.3813 | ambiguous | -2.541 | Highly Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | N |
V/T | 0.142 | likely_benign | 0.1414 | benign | -2.224 | Highly Destabilizing | 0.993 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/W | 0.9119 | likely_pathogenic | 0.9169 | pathogenic | -1.861 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
V/Y | 0.7245 | likely_pathogenic | 0.7423 | pathogenic | -1.457 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.