Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23337 | 70234;70235;70236 | chr2:178576123;178576122;178576121 | chr2:179440850;179440849;179440848 |
N2AB | 21696 | 65311;65312;65313 | chr2:178576123;178576122;178576121 | chr2:179440850;179440849;179440848 |
N2A | 20769 | 62530;62531;62532 | chr2:178576123;178576122;178576121 | chr2:179440850;179440849;179440848 |
N2B | 14272 | 43039;43040;43041 | chr2:178576123;178576122;178576121 | chr2:179440850;179440849;179440848 |
Novex-1 | 14397 | 43414;43415;43416 | chr2:178576123;178576122;178576121 | chr2:179440850;179440849;179440848 |
Novex-2 | 14464 | 43615;43616;43617 | chr2:178576123;178576122;178576121 | chr2:179440850;179440849;179440848 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.001 | N | 0.215 | 0.146 | 0.252681307341 | gnomAD-4.0.0 | 1.59197E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77824E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1709996308 | None | 0.181 | D | 0.58 | 0.138 | 0.301122078929 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1709996308 | None | 0.181 | D | 0.58 | 0.138 | 0.301122078929 | gnomAD-4.0.0 | 2.56339E-06 | None | None | None | None | N | None | 1.69222E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39402E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4602 | ambiguous | 0.4654 | ambiguous | -0.514 | Destabilizing | 0.1 | N | 0.6 | neutral | N | 0.502944494 | None | None | N |
E/C | 0.9642 | likely_pathogenic | 0.9659 | pathogenic | -0.107 | Destabilizing | 0.96 | D | 0.691 | prob.delet. | None | None | None | None | N |
E/D | 0.1543 | likely_benign | 0.1391 | benign | -0.424 | Destabilizing | None | N | 0.111 | neutral | N | 0.443010756 | None | None | N |
E/F | 0.9664 | likely_pathogenic | 0.9691 | pathogenic | -0.375 | Destabilizing | 0.864 | D | 0.699 | prob.delet. | None | None | None | None | N |
E/G | 0.5012 | ambiguous | 0.5123 | ambiguous | -0.721 | Destabilizing | 0.181 | N | 0.608 | neutral | N | 0.488121865 | None | None | N |
E/H | 0.874 | likely_pathogenic | 0.883 | pathogenic | -0.221 | Destabilizing | 0.676 | D | 0.565 | neutral | None | None | None | None | N |
E/I | 0.876 | likely_pathogenic | 0.8759 | pathogenic | 0.001 | Stabilizing | 0.676 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/K | 0.6806 | likely_pathogenic | 0.7111 | pathogenic | 0.2 | Stabilizing | 0.001 | N | 0.215 | neutral | N | 0.519644743 | None | None | N |
E/L | 0.8237 | likely_pathogenic | 0.8381 | pathogenic | 0.001 | Stabilizing | 0.507 | D | 0.657 | prob.neutral | None | None | None | None | N |
E/M | 0.8772 | likely_pathogenic | 0.8863 | pathogenic | 0.156 | Stabilizing | 0.96 | D | 0.623 | neutral | None | None | None | None | N |
E/N | 0.5715 | likely_pathogenic | 0.57 | pathogenic | -0.139 | Destabilizing | 0.128 | N | 0.579 | neutral | None | None | None | None | N |
E/P | 0.6937 | likely_pathogenic | 0.7172 | pathogenic | -0.151 | Destabilizing | 0.676 | D | 0.66 | prob.neutral | None | None | None | None | N |
E/Q | 0.4417 | ambiguous | 0.4776 | ambiguous | -0.1 | Destabilizing | 0.181 | N | 0.58 | neutral | D | 0.527282791 | None | None | N |
E/R | 0.7871 | likely_pathogenic | 0.8059 | pathogenic | 0.389 | Stabilizing | 0.128 | N | 0.61 | neutral | None | None | None | None | N |
E/S | 0.5198 | ambiguous | 0.5346 | ambiguous | -0.297 | Destabilizing | 0.128 | N | 0.51 | neutral | None | None | None | None | N |
E/T | 0.7088 | likely_pathogenic | 0.7203 | pathogenic | -0.127 | Destabilizing | 0.227 | N | 0.63 | neutral | None | None | None | None | N |
E/V | 0.7104 | likely_pathogenic | 0.7111 | pathogenic | -0.151 | Destabilizing | 0.437 | N | 0.619 | neutral | N | 0.506315026 | None | None | N |
E/W | 0.9849 | likely_pathogenic | 0.9852 | pathogenic | -0.204 | Destabilizing | 0.96 | D | 0.69 | prob.delet. | None | None | None | None | N |
E/Y | 0.9234 | likely_pathogenic | 0.9278 | pathogenic | -0.134 | Destabilizing | 0.864 | D | 0.66 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.