Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2335 | 7228;7229;7230 | chr2:178774261;178774260;178774259 | chr2:179638988;179638987;179638986 |
N2AB | 2335 | 7228;7229;7230 | chr2:178774261;178774260;178774259 | chr2:179638988;179638987;179638986 |
N2A | 2335 | 7228;7229;7230 | chr2:178774261;178774260;178774259 | chr2:179638988;179638987;179638986 |
N2B | 2289 | 7090;7091;7092 | chr2:178774261;178774260;178774259 | chr2:179638988;179638987;179638986 |
Novex-1 | 2289 | 7090;7091;7092 | chr2:178774261;178774260;178774259 | chr2:179638988;179638987;179638986 |
Novex-2 | 2289 | 7090;7091;7092 | chr2:178774261;178774260;178774259 | chr2:179638988;179638987;179638986 |
Novex-3 | 2335 | 7228;7229;7230 | chr2:178774261;178774260;178774259 | chr2:179638988;179638987;179638986 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs756497839 | -0.625 | 0.014 | N | 0.193 | 0.258 | 0.238705975628 | gnomAD-2.1.1 | 1.06E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.50602E-04 | None | 0 | None | 0 | 0 | 0 |
E/K | rs756497839 | -0.625 | 0.014 | N | 0.193 | 0.258 | 0.238705975628 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 3.84468E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs756497839 | -0.625 | 0.014 | N | 0.193 | 0.258 | 0.238705975628 | gnomAD-4.0.0 | 4.95636E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.78269E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1133 | likely_benign | 0.1096 | benign | -0.458 | Destabilizing | 0.565 | D | 0.607 | neutral | N | 0.501573347 | None | None | N |
E/C | 0.6719 | likely_pathogenic | 0.6537 | pathogenic | -0.223 | Destabilizing | 0.996 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/D | 0.1179 | likely_benign | 0.116 | benign | -1.17 | Destabilizing | 0.722 | D | 0.543 | neutral | N | 0.40362138 | None | None | N |
E/F | 0.4901 | ambiguous | 0.474 | ambiguous | -0.639 | Destabilizing | 0.987 | D | 0.72 | prob.delet. | None | None | None | None | N |
E/G | 0.1619 | likely_benign | 0.1613 | benign | -0.767 | Destabilizing | 0.722 | D | 0.655 | neutral | N | 0.504336304 | None | None | N |
E/H | 0.2993 | likely_benign | 0.2952 | benign | -1.077 | Destabilizing | 0.923 | D | 0.615 | neutral | None | None | None | None | N |
E/I | 0.1453 | likely_benign | 0.1343 | benign | 0.356 | Stabilizing | 0.961 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/K | 0.0983 | likely_benign | 0.0972 | benign | -0.501 | Destabilizing | 0.014 | N | 0.193 | neutral | N | 0.4833356 | None | None | N |
E/L | 0.1957 | likely_benign | 0.187 | benign | 0.356 | Stabilizing | 0.775 | D | 0.66 | neutral | None | None | None | None | N |
E/M | 0.2342 | likely_benign | 0.2244 | benign | 0.846 | Stabilizing | 0.989 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/N | 0.1374 | likely_benign | 0.13 | benign | -0.746 | Destabilizing | 0.775 | D | 0.569 | neutral | None | None | None | None | N |
E/P | 0.4244 | ambiguous | 0.4204 | ambiguous | 0.107 | Stabilizing | 0.961 | D | 0.665 | neutral | None | None | None | None | N |
E/Q | 0.0943 | likely_benign | 0.0933 | benign | -0.649 | Destabilizing | 0.034 | N | 0.253 | neutral | N | 0.504426772 | None | None | N |
E/R | 0.177 | likely_benign | 0.1799 | benign | -0.518 | Destabilizing | 0.633 | D | 0.553 | neutral | None | None | None | None | N |
E/S | 0.1369 | likely_benign | 0.1336 | benign | -1.039 | Destabilizing | 0.633 | D | 0.566 | neutral | None | None | None | None | N |
E/T | 0.115 | likely_benign | 0.1096 | benign | -0.787 | Destabilizing | 0.775 | D | 0.618 | neutral | None | None | None | None | N |
E/V | 0.1057 | likely_benign | 0.1006 | benign | 0.107 | Stabilizing | 0.901 | D | 0.659 | neutral | N | 0.486027254 | None | None | N |
E/W | 0.7594 | likely_pathogenic | 0.7472 | pathogenic | -0.711 | Destabilizing | 0.996 | D | 0.702 | prob.neutral | None | None | None | None | N |
E/Y | 0.4166 | ambiguous | 0.408 | ambiguous | -0.46 | Destabilizing | 0.961 | D | 0.72 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.