Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23353 | 70282;70283;70284 | chr2:178576075;178576074;178576073 | chr2:179440802;179440801;179440800 |
N2AB | 21712 | 65359;65360;65361 | chr2:178576075;178576074;178576073 | chr2:179440802;179440801;179440800 |
N2A | 20785 | 62578;62579;62580 | chr2:178576075;178576074;178576073 | chr2:179440802;179440801;179440800 |
N2B | 14288 | 43087;43088;43089 | chr2:178576075;178576074;178576073 | chr2:179440802;179440801;179440800 |
Novex-1 | 14413 | 43462;43463;43464 | chr2:178576075;178576074;178576073 | chr2:179440802;179440801;179440800 |
Novex-2 | 14480 | 43663;43664;43665 | chr2:178576075;178576074;178576073 | chr2:179440802;179440801;179440800 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1709976943 | None | 0.994 | N | 0.662 | 0.38 | 0.299427821978 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1709976943 | None | 0.994 | N | 0.662 | 0.38 | 0.299427821978 | gnomAD-4.0.0 | 6.57678E-06 | None | None | None | None | N | None | 2.41383E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2582 | likely_benign | 0.2464 | benign | -0.62 | Destabilizing | 0.958 | D | 0.393 | neutral | N | 0.47129257 | None | None | N |
T/C | 0.6391 | likely_pathogenic | 0.6492 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
T/D | 0.8878 | likely_pathogenic | 0.8552 | pathogenic | 0.187 | Stabilizing | 0.938 | D | 0.539 | neutral | None | None | None | None | N |
T/E | 0.8432 | likely_pathogenic | 0.797 | pathogenic | 0.159 | Stabilizing | 0.18 | N | 0.309 | neutral | None | None | None | None | N |
T/F | 0.6514 | likely_pathogenic | 0.6564 | pathogenic | -0.834 | Destabilizing | 0.998 | D | 0.696 | prob.neutral | None | None | None | None | N |
T/G | 0.4689 | ambiguous | 0.4735 | ambiguous | -0.832 | Destabilizing | 0.991 | D | 0.609 | neutral | None | None | None | None | N |
T/H | 0.6512 | likely_pathogenic | 0.6389 | pathogenic | -1.115 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
T/I | 0.4456 | ambiguous | 0.3945 | ambiguous | -0.163 | Destabilizing | 0.994 | D | 0.662 | neutral | N | 0.511773755 | None | None | N |
T/K | 0.7747 | likely_pathogenic | 0.761 | pathogenic | -0.573 | Destabilizing | 0.919 | D | 0.576 | neutral | N | 0.468521623 | None | None | N |
T/L | 0.2722 | likely_benign | 0.2585 | benign | -0.163 | Destabilizing | 0.968 | D | 0.53 | neutral | None | None | None | None | N |
T/M | 0.1733 | likely_benign | 0.1681 | benign | 0.016 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
T/N | 0.3091 | likely_benign | 0.2683 | benign | -0.432 | Destabilizing | 0.991 | D | 0.594 | neutral | None | None | None | None | N |
T/P | 0.4858 | ambiguous | 0.4513 | ambiguous | -0.283 | Destabilizing | 0.994 | D | 0.661 | neutral | N | 0.484528439 | None | None | N |
T/Q | 0.6201 | likely_pathogenic | 0.5759 | pathogenic | -0.599 | Destabilizing | 0.982 | D | 0.661 | neutral | None | None | None | None | N |
T/R | 0.7585 | likely_pathogenic | 0.7453 | pathogenic | -0.358 | Destabilizing | 0.988 | D | 0.658 | neutral | N | 0.475332952 | None | None | N |
T/S | 0.2837 | likely_benign | 0.2658 | benign | -0.718 | Destabilizing | 0.958 | D | 0.381 | neutral | N | 0.479543906 | None | None | N |
T/V | 0.2951 | likely_benign | 0.278 | benign | -0.283 | Destabilizing | 0.984 | D | 0.445 | neutral | None | None | None | None | N |
T/W | 0.9025 | likely_pathogenic | 0.9122 | pathogenic | -0.781 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
T/Y | 0.658 | likely_pathogenic | 0.6645 | pathogenic | -0.536 | Destabilizing | 0.998 | D | 0.692 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.