Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23354 | 70285;70286;70287 | chr2:178576072;178576071;178576070 | chr2:179440799;179440798;179440797 |
N2AB | 21713 | 65362;65363;65364 | chr2:178576072;178576071;178576070 | chr2:179440799;179440798;179440797 |
N2A | 20786 | 62581;62582;62583 | chr2:178576072;178576071;178576070 | chr2:179440799;179440798;179440797 |
N2B | 14289 | 43090;43091;43092 | chr2:178576072;178576071;178576070 | chr2:179440799;179440798;179440797 |
Novex-1 | 14414 | 43465;43466;43467 | chr2:178576072;178576071;178576070 | chr2:179440799;179440798;179440797 |
Novex-2 | 14481 | 43666;43667;43668 | chr2:178576072;178576071;178576070 | chr2:179440799;179440798;179440797 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.994 | N | 0.832 | 0.704 | 0.864877026976 | gnomAD-4.0.0 | 1.59181E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85948E-06 | 0 | 0 |
L/R | None | None | 0.976 | N | 0.801 | 0.626 | 0.828681824056 | gnomAD-4.0.0 | 1.59181E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85948E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8028 | likely_pathogenic | 0.7851 | pathogenic | -1.924 | Destabilizing | 0.968 | D | 0.561 | neutral | None | None | None | None | I |
L/C | 0.8791 | likely_pathogenic | 0.8677 | pathogenic | -1.421 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
L/D | 0.9933 | likely_pathogenic | 0.9915 | pathogenic | -1.524 | Destabilizing | 0.991 | D | 0.812 | deleterious | None | None | None | None | I |
L/E | 0.9429 | likely_pathogenic | 0.9308 | pathogenic | -1.45 | Destabilizing | 0.982 | D | 0.748 | deleterious | None | None | None | None | I |
L/F | 0.5627 | ambiguous | 0.5276 | ambiguous | -1.155 | Destabilizing | 0.998 | D | 0.747 | deleterious | N | 0.489317315 | None | None | I |
L/G | 0.9775 | likely_pathogenic | 0.9769 | pathogenic | -2.326 | Highly Destabilizing | 0.991 | D | 0.799 | deleterious | None | None | None | None | I |
L/H | 0.795 | likely_pathogenic | 0.7668 | pathogenic | -1.523 | Destabilizing | 0.998 | D | 0.803 | deleterious | N | 0.498725064 | None | None | I |
L/I | 0.1623 | likely_benign | 0.1481 | benign | -0.855 | Destabilizing | 0.979 | D | 0.518 | neutral | N | 0.45840707 | None | None | I |
L/K | 0.8587 | likely_pathogenic | 0.8443 | pathogenic | -1.638 | Destabilizing | 0.982 | D | 0.739 | prob.delet. | None | None | None | None | I |
L/M | 0.2217 | likely_benign | 0.2066 | benign | -0.778 | Destabilizing | 0.995 | D | 0.763 | deleterious | None | None | None | None | I |
L/N | 0.949 | likely_pathogenic | 0.9406 | pathogenic | -1.603 | Destabilizing | 0.991 | D | 0.823 | deleterious | None | None | None | None | I |
L/P | 0.9832 | likely_pathogenic | 0.982 | pathogenic | -1.182 | Destabilizing | 0.994 | D | 0.832 | deleterious | N | 0.516829319 | None | None | I |
L/Q | 0.765 | likely_pathogenic | 0.7149 | pathogenic | -1.663 | Destabilizing | 0.682 | D | 0.444 | neutral | None | None | None | None | I |
L/R | 0.7895 | likely_pathogenic | 0.7715 | pathogenic | -1.097 | Destabilizing | 0.976 | D | 0.801 | deleterious | N | 0.493445145 | None | None | I |
L/S | 0.9371 | likely_pathogenic | 0.9267 | pathogenic | -2.253 | Highly Destabilizing | 0.991 | D | 0.749 | deleterious | None | None | None | None | I |
L/T | 0.7873 | likely_pathogenic | 0.7722 | pathogenic | -2.047 | Highly Destabilizing | 0.991 | D | 0.74 | deleterious | None | None | None | None | I |
L/V | 0.1589 | likely_benign | 0.15 | benign | -1.182 | Destabilizing | 0.958 | D | 0.46 | neutral | N | 0.478104765 | None | None | I |
L/W | 0.8233 | likely_pathogenic | 0.7973 | pathogenic | -1.294 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
L/Y | 0.8462 | likely_pathogenic | 0.8237 | pathogenic | -1.081 | Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.