Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23360 | 70303;70304;70305 | chr2:178576054;178576053;178576052 | chr2:179440781;179440780;179440779 |
N2AB | 21719 | 65380;65381;65382 | chr2:178576054;178576053;178576052 | chr2:179440781;179440780;179440779 |
N2A | 20792 | 62599;62600;62601 | chr2:178576054;178576053;178576052 | chr2:179440781;179440780;179440779 |
N2B | 14295 | 43108;43109;43110 | chr2:178576054;178576053;178576052 | chr2:179440781;179440780;179440779 |
Novex-1 | 14420 | 43483;43484;43485 | chr2:178576054;178576053;178576052 | chr2:179440781;179440780;179440779 |
Novex-2 | 14487 | 43684;43685;43686 | chr2:178576054;178576053;178576052 | chr2:179440781;179440780;179440779 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.007 | N | 0.19 | 0.075 | 0.27855597813 | gnomAD-4.0.0 | 6.84307E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09625E-06 | 0 | 1.65684E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1825 | likely_benign | 0.1989 | benign | -0.65 | Destabilizing | 0.373 | N | 0.289 | neutral | None | None | None | None | I |
L/C | 0.339 | likely_benign | 0.3324 | benign | -0.644 | Destabilizing | 0.02 | N | 0.27 | neutral | None | None | None | None | I |
L/D | 0.6829 | likely_pathogenic | 0.6783 | pathogenic | 0.103 | Stabilizing | 0.009 | N | 0.313 | neutral | None | None | None | None | I |
L/E | 0.436 | ambiguous | 0.4217 | ambiguous | 0.022 | Stabilizing | 0.59 | D | 0.397 | neutral | None | None | None | None | I |
L/F | 0.183 | likely_benign | 0.2089 | benign | -0.605 | Destabilizing | 0.007 | N | 0.19 | neutral | N | 0.461344935 | None | None | I |
L/G | 0.3502 | ambiguous | 0.3621 | ambiguous | -0.831 | Destabilizing | 0.742 | D | 0.419 | neutral | None | None | None | None | I |
L/H | 0.2581 | likely_benign | 0.2649 | benign | -0.105 | Destabilizing | 0.994 | D | 0.377 | neutral | N | 0.423383979 | None | None | I |
L/I | 0.1447 | likely_benign | 0.1621 | benign | -0.293 | Destabilizing | 0.684 | D | 0.264 | neutral | N | 0.461344935 | None | None | I |
L/K | 0.3389 | likely_benign | 0.3267 | benign | -0.261 | Destabilizing | 0.91 | D | 0.403 | neutral | None | None | None | None | I |
L/M | 0.0977 | likely_benign | 0.104 | benign | -0.326 | Destabilizing | 0.984 | D | 0.32 | neutral | None | None | None | None | I |
L/N | 0.2676 | likely_benign | 0.2603 | benign | -0.059 | Destabilizing | 0.835 | D | 0.414 | neutral | None | None | None | None | I |
L/P | 0.8995 | likely_pathogenic | 0.9057 | pathogenic | -0.378 | Destabilizing | 0.939 | D | 0.407 | neutral | N | 0.460998218 | None | None | I |
L/Q | 0.1641 | likely_benign | 0.1537 | benign | -0.265 | Destabilizing | 0.953 | D | 0.381 | neutral | None | None | None | None | I |
L/R | 0.3104 | likely_benign | 0.3197 | benign | 0.254 | Stabilizing | 0.939 | D | 0.385 | neutral | N | 0.422863904 | None | None | I |
L/S | 0.2143 | likely_benign | 0.2273 | benign | -0.595 | Destabilizing | 0.59 | D | 0.359 | neutral | None | None | None | None | I |
L/T | 0.2008 | likely_benign | 0.203 | benign | -0.56 | Destabilizing | 0.037 | N | 0.234 | neutral | None | None | None | None | I |
L/V | 0.1131 | likely_benign | 0.1271 | benign | -0.378 | Destabilizing | 0.472 | N | 0.288 | neutral | N | 0.383057509 | None | None | I |
L/W | 0.4508 | ambiguous | 0.4839 | ambiguous | -0.607 | Destabilizing | 0.996 | D | 0.369 | neutral | None | None | None | None | I |
L/Y | 0.343 | ambiguous | 0.3632 | ambiguous | -0.349 | Destabilizing | 0.835 | D | 0.329 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.