Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23367 | 70324;70325;70326 | chr2:178576033;178576032;178576031 | chr2:179440760;179440759;179440758 |
N2AB | 21726 | 65401;65402;65403 | chr2:178576033;178576032;178576031 | chr2:179440760;179440759;179440758 |
N2A | 20799 | 62620;62621;62622 | chr2:178576033;178576032;178576031 | chr2:179440760;179440759;179440758 |
N2B | 14302 | 43129;43130;43131 | chr2:178576033;178576032;178576031 | chr2:179440760;179440759;179440758 |
Novex-1 | 14427 | 43504;43505;43506 | chr2:178576033;178576032;178576031 | chr2:179440760;179440759;179440758 |
Novex-2 | 14494 | 43705;43706;43707 | chr2:178576033;178576032;178576031 | chr2:179440760;179440759;179440758 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.999 | N | 0.776 | 0.421 | 0.852004672353 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.3311 | likely_benign | 0.3788 | ambiguous | -1.148 | Destabilizing | 0.992 | D | 0.573 | neutral | D | 0.526784146 | None | None | I |
P/C | 0.9267 | likely_pathogenic | 0.9473 | pathogenic | -0.759 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
P/D | 0.9408 | likely_pathogenic | 0.9529 | pathogenic | -0.895 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | I |
P/E | 0.8722 | likely_pathogenic | 0.901 | pathogenic | -0.855 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | I |
P/F | 0.961 | likely_pathogenic | 0.9717 | pathogenic | -0.729 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | I |
P/G | 0.7703 | likely_pathogenic | 0.8124 | pathogenic | -1.479 | Destabilizing | 0.997 | D | 0.706 | prob.neutral | None | None | None | None | I |
P/H | 0.7717 | likely_pathogenic | 0.8142 | pathogenic | -0.923 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
P/I | 0.8817 | likely_pathogenic | 0.916 | pathogenic | -0.336 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
P/K | 0.8812 | likely_pathogenic | 0.904 | pathogenic | -0.971 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | I |
P/L | 0.5497 | ambiguous | 0.6153 | pathogenic | -0.336 | Destabilizing | 0.999 | D | 0.776 | deleterious | N | 0.50518939 | None | None | I |
P/M | 0.8339 | likely_pathogenic | 0.8707 | pathogenic | -0.374 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
P/N | 0.8335 | likely_pathogenic | 0.8776 | pathogenic | -0.9 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | I |
P/Q | 0.7148 | likely_pathogenic | 0.7626 | pathogenic | -0.978 | Destabilizing | 0.999 | D | 0.812 | deleterious | N | 0.488829427 | None | None | I |
P/R | 0.7776 | likely_pathogenic | 0.8163 | pathogenic | -0.543 | Destabilizing | 0.999 | D | 0.795 | deleterious | N | 0.515297716 | None | None | I |
P/S | 0.5157 | ambiguous | 0.579 | pathogenic | -1.418 | Destabilizing | 0.957 | D | 0.428 | neutral | D | 0.522301046 | None | None | I |
P/T | 0.4085 | ambiguous | 0.4829 | ambiguous | -1.259 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | N | 0.512486697 | None | None | I |
P/V | 0.7456 | likely_pathogenic | 0.8051 | pathogenic | -0.572 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
P/W | 0.9801 | likely_pathogenic | 0.9847 | pathogenic | -0.968 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
P/Y | 0.9447 | likely_pathogenic | 0.9573 | pathogenic | -0.627 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.