Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23369 | 70330;70331;70332 | chr2:178576027;178576026;178576025 | chr2:179440754;179440753;179440752 |
N2AB | 21728 | 65407;65408;65409 | chr2:178576027;178576026;178576025 | chr2:179440754;179440753;179440752 |
N2A | 20801 | 62626;62627;62628 | chr2:178576027;178576026;178576025 | chr2:179440754;179440753;179440752 |
N2B | 14304 | 43135;43136;43137 | chr2:178576027;178576026;178576025 | chr2:179440754;179440753;179440752 |
Novex-1 | 14429 | 43510;43511;43512 | chr2:178576027;178576026;178576025 | chr2:179440754;179440753;179440752 |
Novex-2 | 14496 | 43711;43712;43713 | chr2:178576027;178576026;178576025 | chr2:179440754;179440753;179440752 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1277463353 | None | 0.822 | N | 0.541 | 0.179 | 0.332386209738 | gnomAD-4.0.0 | 1.59238E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86071E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4862 | ambiguous | 0.6136 | pathogenic | -0.042 | Destabilizing | 0.86 | D | 0.56 | neutral | None | None | None | None | I |
K/C | 0.683 | likely_pathogenic | 0.7783 | pathogenic | -0.613 | Destabilizing | 0.998 | D | 0.625 | neutral | None | None | None | None | I |
K/D | 0.8496 | likely_pathogenic | 0.9123 | pathogenic | -0.277 | Destabilizing | 0.978 | D | 0.586 | neutral | None | None | None | None | I |
K/E | 0.3836 | ambiguous | 0.5004 | ambiguous | -0.29 | Destabilizing | 0.822 | D | 0.541 | neutral | N | 0.481801218 | None | None | I |
K/F | 0.8451 | likely_pathogenic | 0.9076 | pathogenic | -0.417 | Destabilizing | 0.998 | D | 0.597 | neutral | None | None | None | None | I |
K/G | 0.6838 | likely_pathogenic | 0.7864 | pathogenic | -0.151 | Destabilizing | 0.956 | D | 0.49 | neutral | None | None | None | None | I |
K/H | 0.312 | likely_benign | 0.3802 | ambiguous | -0.207 | Destabilizing | 0.994 | D | 0.582 | neutral | None | None | None | None | I |
K/I | 0.4582 | ambiguous | 0.5896 | pathogenic | 0.16 | Stabilizing | 0.971 | D | 0.612 | neutral | N | 0.493751795 | None | None | I |
K/L | 0.5318 | ambiguous | 0.6426 | pathogenic | 0.16 | Stabilizing | 0.956 | D | 0.49 | neutral | None | None | None | None | I |
K/M | 0.3518 | ambiguous | 0.448 | ambiguous | -0.205 | Destabilizing | 0.998 | D | 0.574 | neutral | None | None | None | None | I |
K/N | 0.6646 | likely_pathogenic | 0.7736 | pathogenic | -0.159 | Destabilizing | 0.942 | D | 0.573 | neutral | D | 0.535406416 | None | None | I |
K/P | 0.9775 | likely_pathogenic | 0.9866 | pathogenic | 0.115 | Stabilizing | 0.993 | D | 0.585 | neutral | None | None | None | None | I |
K/Q | 0.176 | likely_benign | 0.217 | benign | -0.274 | Destabilizing | 0.942 | D | 0.576 | neutral | N | 0.452193174 | None | None | I |
K/R | 0.0764 | likely_benign | 0.0828 | benign | -0.185 | Destabilizing | 0.006 | N | 0.263 | neutral | N | 0.449768944 | None | None | I |
K/S | 0.5348 | ambiguous | 0.6599 | pathogenic | -0.519 | Destabilizing | 0.86 | D | 0.541 | neutral | None | None | None | None | I |
K/T | 0.218 | likely_benign | 0.2938 | benign | -0.42 | Destabilizing | 0.942 | D | 0.547 | neutral | N | 0.457348277 | None | None | I |
K/V | 0.4132 | ambiguous | 0.5311 | ambiguous | 0.115 | Stabilizing | 0.978 | D | 0.584 | neutral | None | None | None | None | I |
K/W | 0.7948 | likely_pathogenic | 0.871 | pathogenic | -0.53 | Destabilizing | 0.998 | D | 0.641 | neutral | None | None | None | None | I |
K/Y | 0.7315 | likely_pathogenic | 0.8249 | pathogenic | -0.178 | Destabilizing | 0.993 | D | 0.584 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.