Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23370 | 70333;70334;70335 | chr2:178576024;178576023;178576022 | chr2:179440751;179440750;179440749 |
N2AB | 21729 | 65410;65411;65412 | chr2:178576024;178576023;178576022 | chr2:179440751;179440750;179440749 |
N2A | 20802 | 62629;62630;62631 | chr2:178576024;178576023;178576022 | chr2:179440751;179440750;179440749 |
N2B | 14305 | 43138;43139;43140 | chr2:178576024;178576023;178576022 | chr2:179440751;179440750;179440749 |
Novex-1 | 14430 | 43513;43514;43515 | chr2:178576024;178576023;178576022 | chr2:179440751;179440750;179440749 |
Novex-2 | 14497 | 43714;43715;43716 | chr2:178576024;178576023;178576022 | chr2:179440751;179440750;179440749 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1372713604 | None | 1.0 | D | 0.837 | 0.82 | 0.647389606501 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
G/D | rs1372713604 | None | 1.0 | D | 0.837 | 0.82 | 0.647389606501 | gnomAD-4.0.0 | 1.23988E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69573E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.8137 | likely_pathogenic | 0.8658 | pathogenic | -0.297 | Destabilizing | 1.0 | D | 0.756 | deleterious | D | 0.555107025 | None | None | I |
G/C | 0.9769 | likely_pathogenic | 0.9865 | pathogenic | -0.752 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | D | 0.622827664 | None | None | I |
G/D | 0.9948 | likely_pathogenic | 0.9965 | pathogenic | -0.899 | Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.621616838 | None | None | I |
G/E | 0.9968 | likely_pathogenic | 0.9977 | pathogenic | -1.051 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
G/F | 0.9979 | likely_pathogenic | 0.9985 | pathogenic | -0.991 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
G/H | 0.9991 | likely_pathogenic | 0.9995 | pathogenic | -0.699 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
G/I | 0.9967 | likely_pathogenic | 0.9979 | pathogenic | -0.373 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
G/K | 0.9991 | likely_pathogenic | 0.9994 | pathogenic | -1.051 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
G/L | 0.9966 | likely_pathogenic | 0.9977 | pathogenic | -0.373 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/M | 0.9981 | likely_pathogenic | 0.9988 | pathogenic | -0.451 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
G/N | 0.9972 | likely_pathogenic | 0.9983 | pathogenic | -0.565 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
G/P | 0.9993 | likely_pathogenic | 0.9996 | pathogenic | -0.314 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
G/Q | 0.9984 | likely_pathogenic | 0.999 | pathogenic | -0.853 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
G/R | 0.9972 | likely_pathogenic | 0.9981 | pathogenic | -0.591 | Destabilizing | 1.0 | D | 0.81 | deleterious | D | 0.622424056 | None | None | I |
G/S | 0.9243 | likely_pathogenic | 0.9566 | pathogenic | -0.643 | Destabilizing | 1.0 | D | 0.82 | deleterious | D | 0.605799282 | None | None | I |
G/T | 0.9907 | likely_pathogenic | 0.9943 | pathogenic | -0.738 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
G/V | 0.9901 | likely_pathogenic | 0.9932 | pathogenic | -0.314 | Destabilizing | 1.0 | D | 0.793 | deleterious | D | 0.622424056 | None | None | I |
G/W | 0.9966 | likely_pathogenic | 0.9978 | pathogenic | -1.199 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
G/Y | 0.9971 | likely_pathogenic | 0.9982 | pathogenic | -0.849 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.