Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23373 | 70342;70343;70344 | chr2:178576015;178576014;178576013 | chr2:179440742;179440741;179440740 |
N2AB | 21732 | 65419;65420;65421 | chr2:178576015;178576014;178576013 | chr2:179440742;179440741;179440740 |
N2A | 20805 | 62638;62639;62640 | chr2:178576015;178576014;178576013 | chr2:179440742;179440741;179440740 |
N2B | 14308 | 43147;43148;43149 | chr2:178576015;178576014;178576013 | chr2:179440742;179440741;179440740 |
Novex-1 | 14433 | 43522;43523;43524 | chr2:178576015;178576014;178576013 | chr2:179440742;179440741;179440740 |
Novex-2 | 14500 | 43723;43724;43725 | chr2:178576015;178576014;178576013 | chr2:179440742;179440741;179440740 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.012 | N | 0.183 | 0.143 | 0.327686398923 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3839 | ambiguous | 0.4605 | ambiguous | -0.667 | Destabilizing | 0.996 | D | 0.375 | neutral | None | None | None | None | I |
A/D | 0.3208 | likely_benign | 0.4045 | ambiguous | -0.76 | Destabilizing | 0.884 | D | 0.495 | neutral | N | 0.51375892 | None | None | I |
A/E | 0.2513 | likely_benign | 0.3106 | benign | -0.913 | Destabilizing | 0.742 | D | 0.379 | neutral | None | None | None | None | I |
A/F | 0.2551 | likely_benign | 0.3272 | benign | -1.051 | Destabilizing | 0.02 | N | 0.348 | neutral | None | None | None | None | I |
A/G | 0.1861 | likely_benign | 0.2168 | benign | -0.553 | Destabilizing | 0.684 | D | 0.249 | neutral | N | 0.485403295 | None | None | I |
A/H | 0.4093 | ambiguous | 0.4887 | ambiguous | -0.713 | Destabilizing | 0.996 | D | 0.516 | neutral | None | None | None | None | I |
A/I | 0.1247 | likely_benign | 0.1587 | benign | -0.454 | Destabilizing | 0.59 | D | 0.376 | neutral | None | None | None | None | I |
A/K | 0.3803 | ambiguous | 0.4851 | ambiguous | -0.899 | Destabilizing | 0.742 | D | 0.376 | neutral | None | None | None | None | I |
A/L | 0.1117 | likely_benign | 0.1315 | benign | -0.454 | Destabilizing | 0.373 | N | 0.342 | neutral | None | None | None | None | I |
A/M | 0.1393 | likely_benign | 0.167 | benign | -0.372 | Destabilizing | 0.953 | D | 0.407 | neutral | None | None | None | None | I |
A/N | 0.209 | likely_benign | 0.2551 | benign | -0.439 | Destabilizing | 0.91 | D | 0.515 | neutral | None | None | None | None | I |
A/P | 0.1039 | likely_benign | 0.1165 | benign | -0.426 | Destabilizing | 0.007 | N | 0.275 | neutral | N | 0.436415645 | None | None | I |
A/Q | 0.27 | likely_benign | 0.3186 | benign | -0.748 | Destabilizing | 0.953 | D | 0.409 | neutral | None | None | None | None | I |
A/R | 0.3845 | ambiguous | 0.4758 | ambiguous | -0.406 | Destabilizing | 0.953 | D | 0.409 | neutral | None | None | None | None | I |
A/S | 0.0936 | likely_benign | 0.0976 | benign | -0.61 | Destabilizing | 0.521 | D | 0.294 | neutral | N | 0.509950611 | None | None | I |
A/T | 0.0694 | likely_benign | 0.0752 | benign | -0.694 | Destabilizing | 0.012 | N | 0.183 | neutral | N | 0.42898824 | None | None | I |
A/V | 0.0803 | likely_benign | 0.0935 | benign | -0.426 | Destabilizing | 0.012 | N | 0.183 | neutral | N | 0.489460696 | None | None | I |
A/W | 0.6854 | likely_pathogenic | 0.7699 | pathogenic | -1.212 | Destabilizing | 0.996 | D | 0.559 | neutral | None | None | None | None | I |
A/Y | 0.3714 | ambiguous | 0.4662 | ambiguous | -0.879 | Destabilizing | 0.835 | D | 0.52 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.