Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23379 | 70360;70361;70362 | chr2:178575997;178575996;178575995 | chr2:179440724;179440723;179440722 |
N2AB | 21738 | 65437;65438;65439 | chr2:178575997;178575996;178575995 | chr2:179440724;179440723;179440722 |
N2A | 20811 | 62656;62657;62658 | chr2:178575997;178575996;178575995 | chr2:179440724;179440723;179440722 |
N2B | 14314 | 43165;43166;43167 | chr2:178575997;178575996;178575995 | chr2:179440724;179440723;179440722 |
Novex-1 | 14439 | 43540;43541;43542 | chr2:178575997;178575996;178575995 | chr2:179440724;179440723;179440722 |
Novex-2 | 14506 | 43741;43742;43743 | chr2:178575997;178575996;178575995 | chr2:179440724;179440723;179440722 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.166 | N | 0.439 | 0.093 | 0.0986583533028 | gnomAD-4.0.0 | 1.59481E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86689E-06 | 0 | 0 |
T/I | rs773975500 | 0.2 | 0.326 | N | 0.631 | 0.119 | 0.21279746466 | gnomAD-2.1.1 | 2.42E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.96284E-04 | None | 0 | 0 | 0 |
T/I | rs773975500 | 0.2 | 0.326 | N | 0.631 | 0.119 | 0.21279746466 | gnomAD-4.0.0 | 6.84935E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16007E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0986 | likely_benign | 0.0914 | benign | -1.178 | Destabilizing | 0.166 | N | 0.439 | neutral | N | 0.452640694 | None | None | N |
T/C | 0.3323 | likely_benign | 0.3117 | benign | -0.837 | Destabilizing | 0.991 | D | 0.65 | neutral | None | None | None | None | N |
T/D | 0.4664 | ambiguous | 0.449 | ambiguous | -1.049 | Destabilizing | 0.561 | D | 0.652 | neutral | None | None | None | None | N |
T/E | 0.2225 | likely_benign | 0.242 | benign | -0.897 | Destabilizing | 0.39 | N | 0.629 | neutral | None | None | None | None | N |
T/F | 0.2374 | likely_benign | 0.2258 | benign | -1.012 | Destabilizing | 0.39 | N | 0.705 | prob.neutral | None | None | None | None | N |
T/G | 0.2453 | likely_benign | 0.224 | benign | -1.557 | Destabilizing | 0.561 | D | 0.649 | neutral | None | None | None | None | N |
T/H | 0.2085 | likely_benign | 0.2043 | benign | -1.748 | Destabilizing | 0.818 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/I | 0.1929 | likely_benign | 0.1888 | benign | -0.201 | Destabilizing | 0.326 | N | 0.631 | neutral | N | 0.451880226 | None | None | N |
T/K | 0.1768 | likely_benign | 0.1952 | benign | -0.528 | Destabilizing | 0.004 | N | 0.401 | neutral | None | None | None | None | N |
T/L | 0.1007 | likely_benign | 0.0992 | benign | -0.201 | Destabilizing | 0.002 | N | 0.355 | neutral | None | None | None | None | N |
T/M | 0.0757 | likely_benign | 0.0745 | benign | -0.101 | Destabilizing | 0.103 | N | 0.51 | neutral | None | None | None | None | N |
T/N | 0.1319 | likely_benign | 0.124 | benign | -1.026 | Destabilizing | 0.491 | N | 0.553 | neutral | N | 0.453147673 | None | None | N |
T/P | 0.8941 | likely_pathogenic | 0.8981 | pathogenic | -0.495 | Destabilizing | 0.873 | D | 0.687 | prob.neutral | N | 0.479734625 | None | None | N |
T/Q | 0.152 | likely_benign | 0.1507 | benign | -0.931 | Destabilizing | 0.818 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/R | 0.1533 | likely_benign | 0.1657 | benign | -0.64 | Destabilizing | 0.39 | N | 0.667 | neutral | None | None | None | None | N |
T/S | 0.0962 | likely_benign | 0.0891 | benign | -1.313 | Destabilizing | 0.016 | N | 0.227 | neutral | N | 0.44543412 | None | None | N |
T/V | 0.1444 | likely_benign | 0.1426 | benign | -0.495 | Destabilizing | 0.209 | N | 0.503 | neutral | None | None | None | None | N |
T/W | 0.5853 | likely_pathogenic | 0.5667 | pathogenic | -1.051 | Destabilizing | 0.972 | D | 0.662 | neutral | None | None | None | None | N |
T/Y | 0.2821 | likely_benign | 0.2717 | benign | -0.707 | Destabilizing | 0.017 | N | 0.563 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.