Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23393 | 70402;70403;70404 | chr2:178575955;178575954;178575953 | chr2:179440682;179440681;179440680 |
N2AB | 21752 | 65479;65480;65481 | chr2:178575955;178575954;178575953 | chr2:179440682;179440681;179440680 |
N2A | 20825 | 62698;62699;62700 | chr2:178575955;178575954;178575953 | chr2:179440682;179440681;179440680 |
N2B | 14328 | 43207;43208;43209 | chr2:178575955;178575954;178575953 | chr2:179440682;179440681;179440680 |
Novex-1 | 14453 | 43582;43583;43584 | chr2:178575955;178575954;178575953 | chr2:179440682;179440681;179440680 |
Novex-2 | 14520 | 43783;43784;43785 | chr2:178575955;178575954;178575953 | chr2:179440682;179440681;179440680 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs1040909022 | None | 0.379 | N | 0.361 | 0.166 | 0.0846915920261 | gnomAD-4.0.0 | 1.59653E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43402E-05 | 0 |
N/T | rs1709929760 | None | 0.007 | N | 0.267 | 0.101 | 0.193865811164 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.1425E-04 | 0 |
N/T | rs1709929760 | None | 0.007 | N | 0.267 | 0.101 | 0.193865811164 | gnomAD-4.0.0 | 1.31463E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.1425E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2842 | likely_benign | 0.3137 | benign | -0.755 | Destabilizing | 0.25 | N | 0.529 | neutral | None | None | None | None | N |
N/C | 0.2718 | likely_benign | 0.2946 | benign | 0.153 | Stabilizing | 0.992 | D | 0.546 | neutral | None | None | None | None | N |
N/D | 0.2141 | likely_benign | 0.243 | benign | 0.031 | Stabilizing | 0.549 | D | 0.326 | neutral | N | 0.505699585 | None | None | N |
N/E | 0.4875 | ambiguous | 0.5379 | ambiguous | 0.08 | Stabilizing | 0.617 | D | 0.359 | neutral | None | None | None | None | N |
N/F | 0.6499 | likely_pathogenic | 0.6993 | pathogenic | -0.693 | Destabilizing | 0.92 | D | 0.561 | neutral | None | None | None | None | N |
N/G | 0.4174 | ambiguous | 0.4544 | ambiguous | -1.045 | Destabilizing | 0.25 | N | 0.359 | neutral | None | None | None | None | N |
N/H | 0.1636 | likely_benign | 0.1738 | benign | -0.839 | Destabilizing | 0.896 | D | 0.486 | neutral | D | 0.535675775 | None | None | N |
N/I | 0.2069 | likely_benign | 0.2257 | benign | -0.045 | Destabilizing | 0.379 | N | 0.52 | neutral | N | 0.508123814 | None | None | N |
N/K | 0.441 | ambiguous | 0.4743 | ambiguous | -0.072 | Destabilizing | 0.379 | N | 0.361 | neutral | N | 0.51526043 | None | None | N |
N/L | 0.3287 | likely_benign | 0.3648 | ambiguous | -0.045 | Destabilizing | 0.25 | N | 0.535 | neutral | None | None | None | None | N |
N/M | 0.301 | likely_benign | 0.327 | benign | 0.351 | Stabilizing | 0.92 | D | 0.536 | neutral | None | None | None | None | N |
N/P | 0.7804 | likely_pathogenic | 0.8119 | pathogenic | -0.252 | Destabilizing | 0.92 | D | 0.521 | neutral | None | None | None | None | N |
N/Q | 0.4315 | ambiguous | 0.4661 | ambiguous | -0.593 | Destabilizing | 0.85 | D | 0.45 | neutral | None | None | None | None | N |
N/R | 0.5349 | ambiguous | 0.5814 | pathogenic | -0.083 | Destabilizing | 0.85 | D | 0.432 | neutral | None | None | None | None | N |
N/S | 0.1076 | likely_benign | 0.1078 | benign | -0.586 | Destabilizing | 0.016 | N | 0.252 | neutral | N | 0.468912065 | None | None | N |
N/T | 0.1046 | likely_benign | 0.1053 | benign | -0.35 | Destabilizing | 0.007 | N | 0.267 | neutral | N | 0.430471107 | None | None | N |
N/V | 0.203 | likely_benign | 0.2166 | benign | -0.252 | Destabilizing | 0.021 | N | 0.443 | neutral | None | None | None | None | N |
N/W | 0.8609 | likely_pathogenic | 0.888 | pathogenic | -0.48 | Destabilizing | 0.992 | D | 0.591 | neutral | None | None | None | None | N |
N/Y | 0.2219 | likely_benign | 0.2441 | benign | -0.28 | Destabilizing | 0.963 | D | 0.546 | neutral | D | 0.528440371 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.