Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23398 | 70417;70418;70419 | chr2:178575940;178575939;178575938 | chr2:179440667;179440666;179440665 |
N2AB | 21757 | 65494;65495;65496 | chr2:178575940;178575939;178575938 | chr2:179440667;179440666;179440665 |
N2A | 20830 | 62713;62714;62715 | chr2:178575940;178575939;178575938 | chr2:179440667;179440666;179440665 |
N2B | 14333 | 43222;43223;43224 | chr2:178575940;178575939;178575938 | chr2:179440667;179440666;179440665 |
Novex-1 | 14458 | 43597;43598;43599 | chr2:178575940;178575939;178575938 | chr2:179440667;179440666;179440665 |
Novex-2 | 14525 | 43798;43799;43800 | chr2:178575940;178575939;178575938 | chr2:179440667;179440666;179440665 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.896 | N | 0.693 | 0.297 | 0.225215365344 | gnomAD-4.0.0 | 6.84825E-07 | None | None | None | None | N | None | 2.99025E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/S | rs1709923349 | None | 0.046 | N | 0.459 | 0.065 | 0.107399877778 | gnomAD-4.0.0 | 1.36965E-06 | None | None | None | None | N | None | 5.9805E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.4409 | ambiguous | 0.4538 | ambiguous | -1.38 | Destabilizing | 0.64 | D | 0.619 | neutral | N | 0.492339845 | None | None | N |
T/C | 0.802 | likely_pathogenic | 0.8051 | pathogenic | -1.11 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/D | 0.9887 | likely_pathogenic | 0.9912 | pathogenic | -2.453 | Highly Destabilizing | 0.919 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/E | 0.9936 | likely_pathogenic | 0.9949 | pathogenic | -2.116 | Highly Destabilizing | 0.919 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/F | 0.9868 | likely_pathogenic | 0.9896 | pathogenic | -0.769 | Destabilizing | 0.996 | D | 0.753 | deleterious | None | None | None | None | N |
T/G | 0.8405 | likely_pathogenic | 0.853 | pathogenic | -1.83 | Destabilizing | 0.851 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/H | 0.9623 | likely_pathogenic | 0.968 | pathogenic | -1.617 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
T/I | 0.9592 | likely_pathogenic | 0.9673 | pathogenic | -0.12 | Destabilizing | 0.984 | D | 0.743 | deleterious | N | 0.476745657 | None | None | N |
T/K | 0.9945 | likely_pathogenic | 0.9957 | pathogenic | -0.464 | Destabilizing | 0.919 | D | 0.72 | prob.delet. | None | None | None | None | N |
T/L | 0.8502 | likely_pathogenic | 0.8649 | pathogenic | -0.12 | Destabilizing | 0.919 | D | 0.706 | prob.neutral | None | None | None | None | N |
T/M | 0.7145 | likely_pathogenic | 0.7486 | pathogenic | -0.659 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
T/N | 0.8644 | likely_pathogenic | 0.8848 | pathogenic | -1.656 | Destabilizing | 0.896 | D | 0.693 | prob.neutral | N | 0.5143527 | None | None | N |
T/P | 0.9753 | likely_pathogenic | 0.981 | pathogenic | -0.518 | Destabilizing | 0.984 | D | 0.742 | deleterious | N | 0.48911592 | None | None | N |
T/Q | 0.975 | likely_pathogenic | 0.9782 | pathogenic | -1.075 | Destabilizing | 0.988 | D | 0.755 | deleterious | None | None | None | None | N |
T/R | 0.9907 | likely_pathogenic | 0.9924 | pathogenic | -1.047 | Destabilizing | 0.976 | D | 0.737 | prob.delet. | None | None | None | None | N |
T/S | 0.2059 | likely_benign | 0.2179 | benign | -1.819 | Destabilizing | 0.046 | N | 0.459 | neutral | N | 0.460843502 | None | None | N |
T/V | 0.8354 | likely_pathogenic | 0.8498 | pathogenic | -0.518 | Destabilizing | 0.919 | D | 0.675 | prob.neutral | None | None | None | None | N |
T/W | 0.9973 | likely_pathogenic | 0.9978 | pathogenic | -1.098 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
T/Y | 0.9877 | likely_pathogenic | 0.9899 | pathogenic | -0.718 | Destabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.