Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23406 | 70441;70442;70443 | chr2:178575916;178575915;178575914 | chr2:179440643;179440642;179440641 |
N2AB | 21765 | 65518;65519;65520 | chr2:178575916;178575915;178575914 | chr2:179440643;179440642;179440641 |
N2A | 20838 | 62737;62738;62739 | chr2:178575916;178575915;178575914 | chr2:179440643;179440642;179440641 |
N2B | 14341 | 43246;43247;43248 | chr2:178575916;178575915;178575914 | chr2:179440643;179440642;179440641 |
Novex-1 | 14466 | 43621;43622;43623 | chr2:178575916;178575915;178575914 | chr2:179440643;179440642;179440641 |
Novex-2 | 14533 | 43822;43823;43824 | chr2:178575916;178575915;178575914 | chr2:179440643;179440642;179440641 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs757600380 | 0.15 | 0.684 | N | 0.298 | 0.173 | 0.210429274316 | gnomAD-4.0.0 | 1.59168E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77377E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5314 | ambiguous | 0.6262 | pathogenic | -0.864 | Destabilizing | 0.373 | N | 0.422 | neutral | None | None | None | None | I |
N/C | 0.4187 | ambiguous | 0.4756 | ambiguous | 0.121 | Stabilizing | 0.996 | D | 0.473 | neutral | None | None | None | None | I |
N/D | 0.139 | likely_benign | 0.1871 | benign | -0.525 | Destabilizing | 0.684 | D | 0.344 | neutral | N | 0.488132544 | None | None | I |
N/E | 0.7114 | likely_pathogenic | 0.788 | pathogenic | -0.476 | Destabilizing | 0.742 | D | 0.305 | neutral | None | None | None | None | I |
N/F | 0.8338 | likely_pathogenic | 0.8804 | pathogenic | -0.854 | Destabilizing | 0.953 | D | 0.49 | neutral | None | None | None | None | I |
N/G | 0.4014 | ambiguous | 0.4876 | ambiguous | -1.158 | Destabilizing | 0.373 | N | 0.334 | neutral | None | None | None | None | I |
N/H | 0.199 | likely_benign | 0.2192 | benign | -1.059 | Destabilizing | 0.979 | D | 0.411 | neutral | N | 0.511702837 | None | None | I |
N/I | 0.6423 | likely_pathogenic | 0.7222 | pathogenic | -0.134 | Destabilizing | 0.884 | D | 0.469 | neutral | N | 0.520861038 | None | None | I |
N/K | 0.651 | likely_pathogenic | 0.761 | pathogenic | -0.262 | Destabilizing | 0.684 | D | 0.298 | neutral | N | 0.470853505 | None | None | I |
N/L | 0.4772 | ambiguous | 0.5527 | ambiguous | -0.134 | Destabilizing | 0.59 | D | 0.465 | neutral | None | None | None | None | I |
N/M | 0.5822 | likely_pathogenic | 0.6698 | pathogenic | 0.482 | Stabilizing | 0.996 | D | 0.449 | neutral | None | None | None | None | I |
N/P | 0.9248 | likely_pathogenic | 0.9442 | pathogenic | -0.348 | Destabilizing | 0.953 | D | 0.449 | neutral | None | None | None | None | I |
N/Q | 0.6389 | likely_pathogenic | 0.698 | pathogenic | -0.887 | Destabilizing | 0.91 | D | 0.38 | neutral | None | None | None | None | I |
N/R | 0.6944 | likely_pathogenic | 0.7832 | pathogenic | -0.234 | Destabilizing | 0.742 | D | 0.375 | neutral | None | None | None | None | I |
N/S | 0.0956 | likely_benign | 0.1096 | benign | -0.768 | Destabilizing | 0.028 | N | 0.187 | neutral | N | 0.486343033 | None | None | I |
N/T | 0.124 | likely_benign | 0.1629 | benign | -0.537 | Destabilizing | 0.004 | N | 0.139 | neutral | N | 0.447112641 | None | None | I |
N/V | 0.566 | likely_pathogenic | 0.6506 | pathogenic | -0.348 | Destabilizing | 0.59 | D | 0.451 | neutral | None | None | None | None | I |
N/W | 0.9531 | likely_pathogenic | 0.9655 | pathogenic | -0.657 | Destabilizing | 0.996 | D | 0.585 | neutral | None | None | None | None | I |
N/Y | 0.5113 | ambiguous | 0.5792 | pathogenic | -0.454 | Destabilizing | 0.979 | D | 0.465 | neutral | N | 0.500140188 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.