Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23407 | 70444;70445;70446 | chr2:178575913;178575912;178575911 | chr2:179440640;179440639;179440638 |
N2AB | 21766 | 65521;65522;65523 | chr2:178575913;178575912;178575911 | chr2:179440640;179440639;179440638 |
N2A | 20839 | 62740;62741;62742 | chr2:178575913;178575912;178575911 | chr2:179440640;179440639;179440638 |
N2B | 14342 | 43249;43250;43251 | chr2:178575913;178575912;178575911 | chr2:179440640;179440639;179440638 |
Novex-1 | 14467 | 43624;43625;43626 | chr2:178575913;178575912;178575911 | chr2:179440640;179440639;179440638 |
Novex-2 | 14534 | 43825;43826;43827 | chr2:178575913;178575912;178575911 | chr2:179440640;179440639;179440638 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs1417805989 | 0.303 | 0.025 | N | 0.387 | 0.14 | 0.208000267992 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/K | rs1417805989 | 0.303 | 0.025 | N | 0.387 | 0.14 | 0.208000267992 | gnomAD-4.0.0 | 3.18337E-06 | None | None | None | None | I | None | 0 | 4.57331E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9776 | likely_pathogenic | 0.9887 | pathogenic | -0.041 | Destabilizing | 0.845 | D | 0.599 | neutral | None | None | None | None | I |
R/C | 0.7965 | likely_pathogenic | 0.8961 | pathogenic | -0.198 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | I |
R/D | 0.9975 | likely_pathogenic | 0.998 | pathogenic | -0.06 | Destabilizing | 0.975 | D | 0.598 | neutral | None | None | None | None | I |
R/E | 0.9743 | likely_pathogenic | 0.9816 | pathogenic | 0.025 | Stabilizing | 0.845 | D | 0.594 | neutral | None | None | None | None | I |
R/F | 0.9916 | likely_pathogenic | 0.9954 | pathogenic | -0.227 | Destabilizing | 0.996 | D | 0.635 | neutral | None | None | None | None | I |
R/G | 0.9757 | likely_pathogenic | 0.9879 | pathogenic | -0.255 | Destabilizing | 0.892 | D | 0.517 | neutral | N | 0.482065256 | None | None | I |
R/H | 0.6008 | likely_pathogenic | 0.7062 | pathogenic | -0.902 | Destabilizing | 0.987 | D | 0.617 | neutral | None | None | None | None | I |
R/I | 0.9377 | likely_pathogenic | 0.9648 | pathogenic | 0.495 | Stabilizing | 0.983 | D | 0.64 | neutral | N | 0.476189452 | None | None | I |
R/K | 0.3901 | ambiguous | 0.49 | ambiguous | -0.083 | Destabilizing | 0.025 | N | 0.387 | neutral | N | 0.485568589 | None | None | I |
R/L | 0.9328 | likely_pathogenic | 0.9609 | pathogenic | 0.495 | Stabilizing | 0.916 | D | 0.517 | neutral | None | None | None | None | I |
R/M | 0.9682 | likely_pathogenic | 0.9834 | pathogenic | -0.025 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | I |
R/N | 0.9916 | likely_pathogenic | 0.9943 | pathogenic | 0.086 | Stabilizing | 0.975 | D | 0.579 | neutral | None | None | None | None | I |
R/P | 0.9892 | likely_pathogenic | 0.993 | pathogenic | 0.337 | Stabilizing | 0.987 | D | 0.607 | neutral | None | None | None | None | I |
R/Q | 0.629 | likely_pathogenic | 0.74 | pathogenic | 0.045 | Stabilizing | 0.975 | D | 0.582 | neutral | None | None | None | None | I |
R/S | 0.9897 | likely_pathogenic | 0.9944 | pathogenic | -0.253 | Destabilizing | 0.892 | D | 0.592 | neutral | N | 0.466972741 | None | None | I |
R/T | 0.9782 | likely_pathogenic | 0.988 | pathogenic | -0.02 | Destabilizing | 0.967 | D | 0.563 | neutral | N | 0.466972741 | None | None | I |
R/V | 0.9628 | likely_pathogenic | 0.9801 | pathogenic | 0.337 | Stabilizing | 0.975 | D | 0.646 | neutral | None | None | None | None | I |
R/W | 0.9034 | likely_pathogenic | 0.9364 | pathogenic | -0.291 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
R/Y | 0.9628 | likely_pathogenic | 0.9773 | pathogenic | 0.122 | Stabilizing | 0.996 | D | 0.607 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.