Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23408 | 70447;70448;70449 | chr2:178575910;178575909;178575908 | chr2:179440637;179440636;179440635 |
N2AB | 21767 | 65524;65525;65526 | chr2:178575910;178575909;178575908 | chr2:179440637;179440636;179440635 |
N2A | 20840 | 62743;62744;62745 | chr2:178575910;178575909;178575908 | chr2:179440637;179440636;179440635 |
N2B | 14343 | 43252;43253;43254 | chr2:178575910;178575909;178575908 | chr2:179440637;179440636;179440635 |
Novex-1 | 14468 | 43627;43628;43629 | chr2:178575910;178575909;178575908 | chr2:179440637;179440636;179440635 |
Novex-2 | 14535 | 43828;43829;43830 | chr2:178575910;178575909;178575908 | chr2:179440637;179440636;179440635 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.99 | N | 0.445 | 0.337 | 0.414021929199 | gnomAD-4.0.0 | 1.59164E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8593E-06 | 0 | 0 |
Y/H | rs754261585 | 0.796 | 0.81 | N | 0.465 | 0.227 | 0.204665344411 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
Y/H | rs754261585 | 0.796 | 0.81 | N | 0.465 | 0.227 | 0.204665344411 | gnomAD-4.0.0 | 2.05284E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79916E-06 | 0 | 1.65678E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.4565 | ambiguous | 0.4672 | ambiguous | -0.405 | Destabilizing | 0.617 | D | 0.489 | neutral | None | None | None | None | I |
Y/C | 0.226 | likely_benign | 0.2444 | benign | 0.19 | Stabilizing | 0.99 | D | 0.445 | neutral | N | 0.489800973 | None | None | I |
Y/D | 0.2164 | likely_benign | 0.2326 | benign | 1.022 | Stabilizing | 0.004 | N | 0.379 | neutral | N | 0.416089861 | None | None | I |
Y/E | 0.506 | ambiguous | 0.5501 | ambiguous | 0.995 | Stabilizing | 0.447 | N | 0.496 | neutral | None | None | None | None | I |
Y/F | 0.1085 | likely_benign | 0.1129 | benign | -0.243 | Destabilizing | 0.549 | D | 0.489 | neutral | N | 0.452186734 | None | None | I |
Y/G | 0.3897 | ambiguous | 0.4217 | ambiguous | -0.567 | Destabilizing | 0.447 | N | 0.481 | neutral | None | None | None | None | I |
Y/H | 0.1504 | likely_benign | 0.1835 | benign | 0.293 | Stabilizing | 0.81 | D | 0.465 | neutral | N | 0.455611041 | None | None | I |
Y/I | 0.5793 | likely_pathogenic | 0.61 | pathogenic | -0.016 | Destabilizing | 0.447 | N | 0.462 | neutral | None | None | None | None | I |
Y/K | 0.5027 | ambiguous | 0.5912 | pathogenic | 0.362 | Stabilizing | 0.447 | N | 0.451 | neutral | None | None | None | None | I |
Y/L | 0.4417 | ambiguous | 0.4756 | ambiguous | -0.016 | Destabilizing | 0.005 | N | 0.323 | neutral | None | None | None | None | I |
Y/M | 0.5449 | ambiguous | 0.557 | ambiguous | 0.048 | Stabilizing | 0.85 | D | 0.441 | neutral | None | None | None | None | I |
Y/N | 0.0985 | likely_benign | 0.1004 | benign | 0.189 | Stabilizing | 0.004 | N | 0.343 | neutral | N | 0.439678796 | None | None | I |
Y/P | 0.9397 | likely_pathogenic | 0.9389 | pathogenic | -0.125 | Destabilizing | 0.92 | D | 0.444 | neutral | None | None | None | None | I |
Y/Q | 0.3832 | ambiguous | 0.4532 | ambiguous | 0.253 | Stabilizing | 0.85 | D | 0.447 | neutral | None | None | None | None | I |
Y/R | 0.3169 | likely_benign | 0.4332 | ambiguous | 0.525 | Stabilizing | 0.85 | D | 0.46 | neutral | None | None | None | None | I |
Y/S | 0.1956 | likely_benign | 0.1983 | benign | -0.217 | Destabilizing | 0.379 | N | 0.488 | neutral | N | 0.392711569 | None | None | I |
Y/T | 0.382 | ambiguous | 0.3972 | ambiguous | -0.151 | Destabilizing | 0.617 | D | 0.464 | neutral | None | None | None | None | I |
Y/V | 0.4724 | ambiguous | 0.4976 | ambiguous | -0.125 | Destabilizing | 0.447 | N | 0.479 | neutral | None | None | None | None | I |
Y/W | 0.4331 | ambiguous | 0.4916 | ambiguous | -0.46 | Destabilizing | 0.992 | D | 0.471 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.