Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23409 | 70450;70451;70452 | chr2:178575907;178575906;178575905 | chr2:179440634;179440633;179440632 |
N2AB | 21768 | 65527;65528;65529 | chr2:178575907;178575906;178575905 | chr2:179440634;179440633;179440632 |
N2A | 20841 | 62746;62747;62748 | chr2:178575907;178575906;178575905 | chr2:179440634;179440633;179440632 |
N2B | 14344 | 43255;43256;43257 | chr2:178575907;178575906;178575905 | chr2:179440634;179440633;179440632 |
Novex-1 | 14469 | 43630;43631;43632 | chr2:178575907;178575906;178575905 | chr2:179440634;179440633;179440632 |
Novex-2 | 14536 | 43831;43832;43833 | chr2:178575907;178575906;178575905 | chr2:179440634;179440633;179440632 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs1709909119 | None | 0.958 | D | 0.759 | 0.865 | 0.628213846089 | gnomAD-4.0.0 | 1.7107E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.24894E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.9907 | likely_pathogenic | 0.9962 | pathogenic | 0.383 | Stabilizing | 0.988 | D | 0.816 | deleterious | D | 0.625067153 | None | None | N |
D/C | 0.9948 | likely_pathogenic | 0.9976 | pathogenic | 0.344 | Stabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
D/E | 0.9569 | likely_pathogenic | 0.9766 | pathogenic | -0.696 | Destabilizing | 0.067 | N | 0.368 | neutral | D | 0.591585441 | None | None | N |
D/F | 0.9963 | likely_pathogenic | 0.9985 | pathogenic | 0.97 | Stabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
D/G | 0.9905 | likely_pathogenic | 0.9959 | pathogenic | -0.1 | Destabilizing | 0.958 | D | 0.759 | deleterious | D | 0.625268957 | None | None | N |
D/H | 0.9732 | likely_pathogenic | 0.9849 | pathogenic | 0.531 | Stabilizing | 0.998 | D | 0.818 | deleterious | D | 0.550713744 | None | None | N |
D/I | 0.9967 | likely_pathogenic | 0.9989 | pathogenic | 1.684 | Stabilizing | 0.995 | D | 0.87 | deleterious | None | None | None | None | N |
D/K | 0.9964 | likely_pathogenic | 0.9985 | pathogenic | 0.164 | Stabilizing | 0.982 | D | 0.792 | deleterious | None | None | None | None | N |
D/L | 0.9934 | likely_pathogenic | 0.9971 | pathogenic | 1.684 | Stabilizing | 0.991 | D | 0.877 | deleterious | None | None | None | None | N |
D/M | 0.9979 | likely_pathogenic | 0.9993 | pathogenic | 2.139 | Highly Stabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
D/N | 0.9316 | likely_pathogenic | 0.9704 | pathogenic | -0.697 | Destabilizing | 0.988 | D | 0.777 | deleterious | D | 0.623452719 | None | None | N |
D/P | 0.9996 | likely_pathogenic | 0.9998 | pathogenic | 1.281 | Stabilizing | 0.995 | D | 0.824 | deleterious | None | None | None | None | N |
D/Q | 0.9921 | likely_pathogenic | 0.9968 | pathogenic | -0.312 | Destabilizing | 0.982 | D | 0.789 | deleterious | None | None | None | None | N |
D/R | 0.9958 | likely_pathogenic | 0.9982 | pathogenic | 0.089 | Stabilizing | 0.991 | D | 0.862 | deleterious | None | None | None | None | N |
D/S | 0.9643 | likely_pathogenic | 0.9869 | pathogenic | -0.969 | Destabilizing | 0.968 | D | 0.697 | prob.neutral | None | None | None | None | N |
D/T | 0.9944 | likely_pathogenic | 0.9982 | pathogenic | -0.52 | Destabilizing | 0.991 | D | 0.816 | deleterious | None | None | None | None | N |
D/V | 0.9907 | likely_pathogenic | 0.9967 | pathogenic | 1.281 | Stabilizing | 0.994 | D | 0.875 | deleterious | D | 0.625672566 | None | None | N |
D/W | 0.9992 | likely_pathogenic | 0.9996 | pathogenic | 0.954 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
D/Y | 0.9738 | likely_pathogenic | 0.9883 | pathogenic | 1.224 | Stabilizing | 0.999 | D | 0.878 | deleterious | D | 0.625470762 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.