Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23418 | 70477;70478;70479 | chr2:178575880;178575879;178575878 | chr2:179440607;179440606;179440605 |
N2AB | 21777 | 65554;65555;65556 | chr2:178575880;178575879;178575878 | chr2:179440607;179440606;179440605 |
N2A | 20850 | 62773;62774;62775 | chr2:178575880;178575879;178575878 | chr2:179440607;179440606;179440605 |
N2B | 14353 | 43282;43283;43284 | chr2:178575880;178575879;178575878 | chr2:179440607;179440606;179440605 |
Novex-1 | 14478 | 43657;43658;43659 | chr2:178575880;178575879;178575878 | chr2:179440607;179440606;179440605 |
Novex-2 | 14545 | 43858;43859;43860 | chr2:178575880;178575879;178575878 | chr2:179440607;179440606;179440605 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | N | 0.681 | 0.441 | 0.466991082792 | gnomAD-4.0.0 | 2.05285E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.47842E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2191 | likely_benign | 0.2495 | benign | -0.518 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | D | 0.532808828 | None | None | N |
E/C | 0.8451 | likely_pathogenic | 0.883 | pathogenic | -0.065 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/D | 0.3718 | ambiguous | 0.4124 | ambiguous | -0.918 | Destabilizing | 0.999 | D | 0.527 | neutral | N | 0.494811044 | None | None | N |
E/F | 0.8956 | likely_pathogenic | 0.9317 | pathogenic | -0.609 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/G | 0.3633 | ambiguous | 0.3986 | ambiguous | -0.787 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.499192363 | None | None | N |
E/H | 0.5864 | likely_pathogenic | 0.6777 | pathogenic | -0.931 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
E/I | 0.4729 | ambiguous | 0.538 | ambiguous | 0.18 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/K | 0.2216 | likely_benign | 0.2691 | benign | -0.144 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | N | 0.478896985 | None | None | N |
E/L | 0.6179 | likely_pathogenic | 0.6994 | pathogenic | 0.18 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/M | 0.5352 | ambiguous | 0.6104 | pathogenic | 0.593 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/N | 0.4415 | ambiguous | 0.5057 | ambiguous | -0.385 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/P | 0.9931 | likely_pathogenic | 0.9954 | pathogenic | -0.031 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
E/Q | 0.1367 | likely_benign | 0.155 | benign | -0.344 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | N | 0.516820655 | None | None | N |
E/R | 0.383 | ambiguous | 0.4653 | ambiguous | -0.13 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/S | 0.2342 | likely_benign | 0.273 | benign | -0.609 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/T | 0.2187 | likely_benign | 0.2487 | benign | -0.395 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
E/V | 0.2876 | likely_benign | 0.3318 | benign | -0.031 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.518783525 | None | None | N |
E/W | 0.9636 | likely_pathogenic | 0.9776 | pathogenic | -0.559 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/Y | 0.8435 | likely_pathogenic | 0.891 | pathogenic | -0.39 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.