Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23420 | 70483;70484;70485 | chr2:178575874;178575873;178575872 | chr2:179440601;179440600;179440599 |
N2AB | 21779 | 65560;65561;65562 | chr2:178575874;178575873;178575872 | chr2:179440601;179440600;179440599 |
N2A | 20852 | 62779;62780;62781 | chr2:178575874;178575873;178575872 | chr2:179440601;179440600;179440599 |
N2B | 14355 | 43288;43289;43290 | chr2:178575874;178575873;178575872 | chr2:179440601;179440600;179440599 |
Novex-1 | 14480 | 43663;43664;43665 | chr2:178575874;178575873;178575872 | chr2:179440601;179440600;179440599 |
Novex-2 | 14547 | 43864;43865;43866 | chr2:178575874;178575873;178575872 | chr2:179440601;179440600;179440599 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs776633672 | -0.018 | 0.029 | N | 0.375 | 0.143 | 0.481690325388 | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | N | None | 0 | 2.02793E-04 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
P/L | rs776633672 | -0.018 | 0.029 | N | 0.375 | 0.143 | 0.481690325388 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 1.96773E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs776633672 | -0.018 | 0.029 | N | 0.375 | 0.143 | 0.481690325388 | gnomAD-4.0.0 | 1.17766E-05 | None | None | None | None | N | None | 0 | 1.83437E-04 | None | 0 | 2.23055E-05 | None | 0 | 0 | 5.93413E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0512 | likely_benign | 0.0615 | benign | -0.297 | Destabilizing | None | N | 0.135 | neutral | N | 0.423870422 | None | None | N |
P/C | 0.3655 | ambiguous | 0.478 | ambiguous | -0.65 | Destabilizing | 0.356 | N | 0.285 | neutral | None | None | None | None | N |
P/D | 0.2772 | likely_benign | 0.359 | ambiguous | -0.321 | Destabilizing | 0.072 | N | 0.32 | neutral | None | None | None | None | N |
P/E | 0.1848 | likely_benign | 0.2263 | benign | -0.448 | Destabilizing | 0.072 | N | 0.32 | neutral | None | None | None | None | N |
P/F | 0.3708 | ambiguous | 0.4907 | ambiguous | -0.714 | Destabilizing | 0.214 | N | 0.308 | neutral | None | None | None | None | N |
P/G | 0.1906 | likely_benign | 0.2459 | benign | -0.365 | Destabilizing | 0.016 | N | 0.342 | neutral | None | None | None | None | N |
P/H | 0.1575 | likely_benign | 0.1888 | benign | -0.029 | Destabilizing | 0.628 | D | 0.297 | neutral | None | None | None | None | N |
P/I | 0.1603 | likely_benign | 0.2055 | benign | -0.27 | Destabilizing | 0.006 | N | 0.36 | neutral | None | None | None | None | N |
P/K | 0.1678 | likely_benign | 0.2075 | benign | -0.326 | Destabilizing | 0.072 | N | 0.331 | neutral | None | None | None | None | N |
P/L | 0.0906 | likely_benign | 0.0896 | benign | -0.27 | Destabilizing | 0.029 | N | 0.375 | neutral | N | 0.452846535 | None | None | N |
P/M | 0.1823 | likely_benign | 0.229 | benign | -0.417 | Destabilizing | 0.214 | N | 0.3 | neutral | None | None | None | None | N |
P/N | 0.1876 | likely_benign | 0.2375 | benign | -0.078 | Destabilizing | 0.356 | N | 0.332 | neutral | None | None | None | None | N |
P/Q | 0.1286 | likely_benign | 0.1517 | benign | -0.316 | Destabilizing | 0.515 | D | 0.287 | neutral | N | 0.48024378 | None | None | N |
P/R | 0.1447 | likely_benign | 0.1736 | benign | 0.14 | Stabilizing | 0.344 | N | 0.338 | neutral | N | 0.458791072 | None | None | N |
P/S | 0.0953 | likely_benign | 0.1133 | benign | -0.375 | Destabilizing | 0.012 | N | 0.337 | neutral | N | 0.384021168 | None | None | N |
P/T | 0.0701 | likely_benign | 0.082 | benign | -0.41 | Destabilizing | 0.012 | N | 0.349 | neutral | N | 0.45438533 | None | None | N |
P/V | 0.1089 | likely_benign | 0.1346 | benign | -0.249 | Destabilizing | None | N | 0.134 | neutral | None | None | None | None | N |
P/W | 0.5767 | likely_pathogenic | 0.7006 | pathogenic | -0.788 | Destabilizing | 0.864 | D | 0.304 | neutral | None | None | None | None | N |
P/Y | 0.3372 | likely_benign | 0.4454 | ambiguous | -0.489 | Destabilizing | 0.356 | N | 0.307 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.