Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23423 | 70492;70493;70494 | chr2:178575865;178575864;178575863 | chr2:179440592;179440591;179440590 |
N2AB | 21782 | 65569;65570;65571 | chr2:178575865;178575864;178575863 | chr2:179440592;179440591;179440590 |
N2A | 20855 | 62788;62789;62790 | chr2:178575865;178575864;178575863 | chr2:179440592;179440591;179440590 |
N2B | 14358 | 43297;43298;43299 | chr2:178575865;178575864;178575863 | chr2:179440592;179440591;179440590 |
Novex-1 | 14483 | 43672;43673;43674 | chr2:178575865;178575864;178575863 | chr2:179440592;179440591;179440590 |
Novex-2 | 14550 | 43873;43874;43875 | chr2:178575865;178575864;178575863 | chr2:179440592;179440591;179440590 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.958 | N | 0.56 | 0.339 | 0.330589388543 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3355 | likely_benign | 0.3809 | ambiguous | -0.064 | Destabilizing | 0.938 | D | 0.553 | neutral | None | None | None | None | N |
K/C | 0.561 | ambiguous | 0.5951 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
K/D | 0.6406 | likely_pathogenic | 0.6956 | pathogenic | 0.111 | Stabilizing | 0.991 | D | 0.603 | neutral | None | None | None | None | N |
K/E | 0.1509 | likely_benign | 0.1712 | benign | 0.115 | Stabilizing | 0.958 | D | 0.559 | neutral | N | 0.441168103 | None | None | N |
K/F | 0.736 | likely_pathogenic | 0.7846 | pathogenic | -0.299 | Destabilizing | 0.995 | D | 0.698 | prob.neutral | None | None | None | None | N |
K/G | 0.4662 | ambiguous | 0.5298 | ambiguous | -0.257 | Destabilizing | 0.938 | D | 0.6 | neutral | None | None | None | None | N |
K/H | 0.2988 | likely_benign | 0.3266 | benign | -0.534 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
K/I | 0.3064 | likely_benign | 0.3334 | benign | 0.362 | Stabilizing | 0.995 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/L | 0.3627 | ambiguous | 0.4027 | ambiguous | 0.362 | Stabilizing | 0.991 | D | 0.584 | neutral | None | None | None | None | N |
K/M | 0.1885 | likely_benign | 0.2066 | benign | 0.199 | Stabilizing | 0.999 | D | 0.66 | neutral | N | 0.491207101 | None | None | N |
K/N | 0.3959 | ambiguous | 0.4408 | ambiguous | 0.156 | Stabilizing | 0.988 | D | 0.625 | neutral | N | 0.496523018 | None | None | N |
K/P | 0.9093 | likely_pathogenic | 0.9259 | pathogenic | 0.248 | Stabilizing | 0.995 | D | 0.656 | neutral | None | None | None | None | N |
K/Q | 0.1048 | likely_benign | 0.1095 | benign | -0.038 | Destabilizing | 0.988 | D | 0.659 | neutral | N | 0.499467045 | None | None | N |
K/R | 0.0836 | likely_benign | 0.0866 | benign | -0.067 | Destabilizing | 0.958 | D | 0.56 | neutral | N | 0.498795042 | None | None | N |
K/S | 0.2901 | likely_benign | 0.3356 | benign | -0.369 | Destabilizing | 0.288 | N | 0.396 | neutral | None | None | None | None | N |
K/T | 0.1194 | likely_benign | 0.1303 | benign | -0.217 | Destabilizing | 0.919 | D | 0.613 | neutral | N | 0.47841977 | None | None | N |
K/V | 0.2592 | likely_benign | 0.2891 | benign | 0.248 | Stabilizing | 0.991 | D | 0.635 | neutral | None | None | None | None | N |
K/W | 0.7826 | likely_pathogenic | 0.8261 | pathogenic | -0.287 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/Y | 0.6408 | likely_pathogenic | 0.6899 | pathogenic | 0.069 | Stabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.