Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23424 | 70495;70496;70497 | chr2:178575862;178575861;178575860 | chr2:179440589;179440588;179440587 |
N2AB | 21783 | 65572;65573;65574 | chr2:178575862;178575861;178575860 | chr2:179440589;179440588;179440587 |
N2A | 20856 | 62791;62792;62793 | chr2:178575862;178575861;178575860 | chr2:179440589;179440588;179440587 |
N2B | 14359 | 43300;43301;43302 | chr2:178575862;178575861;178575860 | chr2:179440589;179440588;179440587 |
Novex-1 | 14484 | 43675;43676;43677 | chr2:178575862;178575861;178575860 | chr2:179440589;179440588;179440587 |
Novex-2 | 14551 | 43876;43877;43878 | chr2:178575862;178575861;178575860 | chr2:179440589;179440588;179440587 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 1.0 | N | 0.681 | 0.449 | 0.543824025769 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7172 | likely_pathogenic | 0.7606 | pathogenic | 0.016 | Stabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | I |
K/C | 0.8858 | likely_pathogenic | 0.9043 | pathogenic | -0.367 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
K/D | 0.9517 | likely_pathogenic | 0.9562 | pathogenic | 0.16 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
K/E | 0.7402 | likely_pathogenic | 0.7515 | pathogenic | 0.162 | Stabilizing | 0.999 | D | 0.664 | neutral | N | 0.513740278 | None | None | I |
K/F | 0.9567 | likely_pathogenic | 0.9658 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | I |
K/G | 0.8862 | likely_pathogenic | 0.8974 | pathogenic | -0.147 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
K/H | 0.6476 | likely_pathogenic | 0.669 | pathogenic | -0.342 | Destabilizing | 1.0 | D | 0.592 | neutral | None | None | None | None | I |
K/I | 0.6699 | likely_pathogenic | 0.7418 | pathogenic | 0.36 | Stabilizing | 1.0 | D | 0.67 | neutral | D | 0.523285268 | None | None | I |
K/L | 0.7404 | likely_pathogenic | 0.7853 | pathogenic | 0.36 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
K/M | 0.5604 | ambiguous | 0.6169 | pathogenic | 0.09 | Stabilizing | 1.0 | D | 0.587 | neutral | None | None | None | None | I |
K/N | 0.8623 | likely_pathogenic | 0.8862 | pathogenic | 0.134 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.487694246 | None | None | I |
K/P | 0.9909 | likely_pathogenic | 0.9933 | pathogenic | 0.272 | Stabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | I |
K/Q | 0.3574 | ambiguous | 0.3661 | ambiguous | -0.005 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | D | 0.525304066 | None | None | I |
K/R | 0.1361 | likely_benign | 0.1378 | benign | -0.015 | Destabilizing | 0.999 | D | 0.605 | neutral | N | 0.494039796 | None | None | I |
K/S | 0.8384 | likely_pathogenic | 0.8664 | pathogenic | -0.346 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | I |
K/T | 0.5425 | ambiguous | 0.5933 | pathogenic | -0.202 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.512625557 | None | None | I |
K/V | 0.6032 | likely_pathogenic | 0.6713 | pathogenic | 0.272 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
K/W | 0.9687 | likely_pathogenic | 0.9738 | pathogenic | -0.324 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
K/Y | 0.8932 | likely_pathogenic | 0.909 | pathogenic | 0.047 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.