Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23426 | 70501;70502;70503 | chr2:178575856;178575855;178575854 | chr2:179440583;179440582;179440581 |
N2AB | 21785 | 65578;65579;65580 | chr2:178575856;178575855;178575854 | chr2:179440583;179440582;179440581 |
N2A | 20858 | 62797;62798;62799 | chr2:178575856;178575855;178575854 | chr2:179440583;179440582;179440581 |
N2B | 14361 | 43306;43307;43308 | chr2:178575856;178575855;178575854 | chr2:179440583;179440582;179440581 |
Novex-1 | 14486 | 43681;43682;43683 | chr2:178575856;178575855;178575854 | chr2:179440583;179440582;179440581 |
Novex-2 | 14553 | 43882;43883;43884 | chr2:178575856;178575855;178575854 | chr2:179440583;179440582;179440581 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 0.983 | N | 0.583 | 0.322 | 0.197625483188 | gnomAD-4.0.0 | 1.59168E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
G/V | None | None | 0.652 | N | 0.645 | 0.381 | 0.594056560588 | gnomAD-4.0.0 | 1.59168E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77454E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1782 | likely_benign | 0.166 | benign | -0.297 | Destabilizing | 0.983 | D | 0.583 | neutral | N | 0.422000766 | None | None | N |
G/C | 0.4245 | ambiguous | 0.3971 | ambiguous | -0.623 | Destabilizing | 1.0 | D | 0.809 | deleterious | N | 0.498213465 | None | None | N |
G/D | 0.9407 | likely_pathogenic | 0.9189 | pathogenic | -0.128 | Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.503504641 | None | None | N |
G/E | 0.9437 | likely_pathogenic | 0.9221 | pathogenic | -0.171 | Destabilizing | 0.999 | D | 0.854 | deleterious | None | None | None | None | N |
G/F | 0.9269 | likely_pathogenic | 0.9192 | pathogenic | -0.601 | Destabilizing | 0.999 | D | 0.85 | deleterious | None | None | None | None | N |
G/H | 0.947 | likely_pathogenic | 0.9294 | pathogenic | -0.791 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
G/I | 0.7071 | likely_pathogenic | 0.6505 | pathogenic | 0.074 | Stabilizing | 0.996 | D | 0.837 | deleterious | None | None | None | None | N |
G/K | 0.9741 | likely_pathogenic | 0.9672 | pathogenic | -0.692 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
G/L | 0.8428 | likely_pathogenic | 0.8172 | pathogenic | 0.074 | Stabilizing | 0.996 | D | 0.824 | deleterious | None | None | None | None | N |
G/M | 0.8681 | likely_pathogenic | 0.8424 | pathogenic | -0.152 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
G/N | 0.897 | likely_pathogenic | 0.8608 | pathogenic | -0.39 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
G/P | 0.9951 | likely_pathogenic | 0.9942 | pathogenic | -0.007 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
G/Q | 0.9258 | likely_pathogenic | 0.9037 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
G/R | 0.9277 | likely_pathogenic | 0.9141 | pathogenic | -0.529 | Destabilizing | 0.999 | D | 0.859 | deleterious | N | 0.517241943 | None | None | N |
G/S | 0.2904 | likely_benign | 0.2355 | benign | -0.731 | Destabilizing | 0.999 | D | 0.751 | deleterious | N | 0.470429431 | None | None | N |
G/T | 0.4872 | ambiguous | 0.4562 | ambiguous | -0.662 | Destabilizing | 0.998 | D | 0.845 | deleterious | None | None | None | None | N |
G/V | 0.5437 | ambiguous | 0.5011 | ambiguous | -0.007 | Destabilizing | 0.652 | D | 0.645 | neutral | N | 0.45540405 | None | None | N |
G/W | 0.9257 | likely_pathogenic | 0.9101 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
G/Y | 0.9225 | likely_pathogenic | 0.9004 | pathogenic | -0.488 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.