Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23427 | 70504;70505;70506 | chr2:178575853;178575852;178575851 | chr2:179440580;179440579;179440578 |
N2AB | 21786 | 65581;65582;65583 | chr2:178575853;178575852;178575851 | chr2:179440580;179440579;179440578 |
N2A | 20859 | 62800;62801;62802 | chr2:178575853;178575852;178575851 | chr2:179440580;179440579;179440578 |
N2B | 14362 | 43309;43310;43311 | chr2:178575853;178575852;178575851 | chr2:179440580;179440579;179440578 |
Novex-1 | 14487 | 43684;43685;43686 | chr2:178575853;178575852;178575851 | chr2:179440580;179440579;179440578 |
Novex-2 | 14554 | 43885;43886;43887 | chr2:178575853;178575852;178575851 | chr2:179440580;179440579;179440578 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.204 | N | 0.55 | 0.382 | 0.681492719615 | gnomAD-4.0.0 | 1.5917E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85936E-06 | 0 | 0 |
F/Y | rs779382645 | 0.043 | 0.981 | N | 0.576 | 0.254 | 0.571380689955 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7048 | likely_pathogenic | 0.7284 | pathogenic | -1.421 | Destabilizing | 0.845 | D | 0.651 | neutral | None | None | None | None | I |
F/C | 0.6009 | likely_pathogenic | 0.591 | pathogenic | -0.646 | Destabilizing | 0.999 | D | 0.75 | deleterious | N | 0.488490713 | None | None | I |
F/D | 0.9294 | likely_pathogenic | 0.9284 | pathogenic | 0.347 | Stabilizing | 0.975 | D | 0.738 | prob.delet. | None | None | None | None | I |
F/E | 0.9461 | likely_pathogenic | 0.9437 | pathogenic | 0.365 | Stabilizing | 0.975 | D | 0.731 | prob.delet. | None | None | None | None | I |
F/G | 0.9025 | likely_pathogenic | 0.9046 | pathogenic | -1.67 | Destabilizing | 0.845 | D | 0.69 | prob.neutral | None | None | None | None | I |
F/H | 0.72 | likely_pathogenic | 0.7244 | pathogenic | -0.027 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | I |
F/I | 0.4486 | ambiguous | 0.447 | ambiguous | -0.734 | Destabilizing | 0.983 | D | 0.645 | neutral | N | 0.516529867 | None | None | I |
F/K | 0.9561 | likely_pathogenic | 0.9557 | pathogenic | -0.548 | Destabilizing | 0.975 | D | 0.737 | prob.delet. | None | None | None | None | I |
F/L | 0.9558 | likely_pathogenic | 0.9548 | pathogenic | -0.734 | Destabilizing | 0.892 | D | 0.6 | neutral | N | 0.502965924 | None | None | I |
F/M | 0.6417 | likely_pathogenic | 0.6549 | pathogenic | -0.628 | Destabilizing | 0.996 | D | 0.659 | neutral | None | None | None | None | I |
F/N | 0.6893 | likely_pathogenic | 0.7003 | pathogenic | -0.526 | Destabilizing | 0.975 | D | 0.749 | deleterious | None | None | None | None | I |
F/P | 0.9945 | likely_pathogenic | 0.9912 | pathogenic | -0.947 | Destabilizing | 0.987 | D | 0.759 | deleterious | None | None | None | None | I |
F/Q | 0.8998 | likely_pathogenic | 0.8964 | pathogenic | -0.58 | Destabilizing | 0.975 | D | 0.759 | deleterious | None | None | None | None | I |
F/R | 0.9276 | likely_pathogenic | 0.9257 | pathogenic | 0.012 | Stabilizing | 0.975 | D | 0.754 | deleterious | None | None | None | None | I |
F/S | 0.4919 | ambiguous | 0.5332 | ambiguous | -1.274 | Destabilizing | 0.204 | N | 0.55 | neutral | N | 0.427908018 | None | None | I |
F/T | 0.4857 | ambiguous | 0.5318 | ambiguous | -1.164 | Destabilizing | 0.845 | D | 0.681 | prob.neutral | None | None | None | None | I |
F/V | 0.4125 | ambiguous | 0.4236 | ambiguous | -0.947 | Destabilizing | 0.892 | D | 0.686 | prob.neutral | N | 0.471546939 | None | None | I |
F/W | 0.6983 | likely_pathogenic | 0.699 | pathogenic | -0.199 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | I |
F/Y | 0.2496 | likely_benign | 0.2481 | benign | -0.324 | Destabilizing | 0.981 | D | 0.576 | neutral | N | 0.494154439 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.